Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC090058.1-201ENST00000498788 435 ntBASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 NDUFB5P1-201ENST00000508134 564 ntBASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 IMPA1P1-201ENST00000510718 842 ntBASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 AC008837.1-201ENST00000511513 412 ntBASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 IGLV3-24-201ENST00000517477 197 ntBASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 HMGB1P40-201ENST00000525121 540 ntBASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 OR5AK3P-201ENST00000527486 1297 ntBASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 AC093388.1-201ENST00000609166 430 ntBASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 AL355493.4-201ENST00000618530 292 ntBASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 AC145207.9-201ENST00000623802 325 ntBASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 AP002967.1-201ENST00000624203 539 ntBASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC187A0A096LP49 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 MIR133A2-201ENST00000347538 102 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 MIR133B-201ENST00000362210 119 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 RN7SKP115-201ENST00000363177 317 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 SNORD1C-201ENST00000363315 78 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 RNU6-532P-201ENST00000384318 107 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 SNORD65C-201ENST00000390962 71 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 AL021331.1-201ENST00000402817 582 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 Y_RNA.625-201ENST00000411256 107 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 AC105402.1-201ENST00000413336 545 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 AL139128.1-201ENST00000413921 941 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 AC005005.2-201ENST00000420779 380 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 DPY19L1P2-201ENST00000426647 915 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 MTCO1P52-201ENST00000433928 531 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 CYCSP11-201ENST00000436426 315 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 MTCYBP31-201ENST00000438855 1122 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 RPS11P7-201ENST00000442125 465 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 RPS23P9-201ENST00000448848 438 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 AL035407.2-201ENST00000454090 378 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 AL389915.2-201ENST00000454576 441 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 AC109462.1-201ENST00000491087 368 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 AC023050.1-201ENST00000498198 304 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 SNRPCP2-201ENST00000504370 475 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 AC021106.1-201ENST00000509020 1058 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 RN7SKP66-201ENST00000516681 231 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 AL390726.5-202ENST00000564800 256 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 AC245036.5-201ENST00000596330 847 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 AC006115.2-201ENST00000596823 202 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 DUXAP3-201ENST00000603616 594 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 TAS2R6P-201ENST00000605022 826 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 AC017104.5-201ENST00000637647 639 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 AL133268.1-201ENST00000405676 1401 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 HSPA8P18-201ENST00000439846 1928 ntBASIC5.28□□□□□ -1.56
CCDC187A0A096LP49 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms