Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 AC097504.1-201ENST00000515103 2415 ntBASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 AC008957.3-201ENST00000624112 2242 ntBASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 Y_RNA.159-201ENST00000363674 87 ntBASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 Y_RNA.419-201ENST00000384041 102 ntBASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 RNU2-6P-201ENST00000411404 190 ntBASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 AC093107.1-201ENST00000422772 609 ntBASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 RPL35AP12-201ENST00000425362 338 ntBASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 CBX1P4-201ENST00000439415 457 ntBASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 RPL7P12-201ENST00000446719 750 ntBASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 PRDX1P1-201ENST00000449329 596 ntBASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 RPL31P15-201ENST00000449770 338 ntBASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 HMGN3P1-201ENST00000453847 193 ntBASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 MTND6P8-201ENST00000503471 522 ntBASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 AP003181.2-201ENST00000528941 181 ntBASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 AC018523.1-201ENST00000534211 512 ntBASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 ANP32BP1-202ENST00000568553 737 ntBASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 AL355375.2-201ENST00000574825 175 ntBASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 IGLJCOR18-201ENST00000584002 424 ntBASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 AL953862.2-201ENST00000603089 820 ntBASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 AL121655.1-201ENST00000605811 308 ntBASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 AC008966.2-201ENST00000606157 453 ntBASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 uc_338.33-201ENST00000614988 170 ntBASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 uc_338.37-201ENST00000620113 186 ntBASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 AC015871.5-202ENST00000623252 701 ntBASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 OFD1P17-201ENST00000437639 3018 ntBASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
PCDHGA11Q9Y5H2 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 AC102941.1-201ENST00000567616 1537 ntBASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 AL138847.1-201ENST00000258651 546 ntBASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 RNU6-657P-201ENST00000383904 107 ntBASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 RPL23AP32-201ENST00000395315 459 ntBASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 RN7SKP29-201ENST00000410957 272 ntBASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 RPL12P9-201ENST00000412942 488 ntBASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 AC023141.1-201ENST00000419418 379 ntBASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 NCOR1P3-201ENST00000420479 303 ntBASIC6.91□□□□□ -1.3
PCDHGA11Q9Y5H2 OR10T1P-201ENST00000424327 947 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms