Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 AC005539.1-201ENST00000443768 1479 ntBASIC5.71□□□□□ -1.5
PCDHGA6Q9Y5G7 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 AL512646.1-201ENST00000269395 1077 ntBASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 RNU105B-201ENST00000364478 208 ntBASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 RNU6-619P-201ENST00000365146 108 ntBASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 OR7E101P-201ENST00000400428 513 ntBASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 RN7SKP166-201ENST00000410812 305 ntBASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 RN7SKP286-201ENST00000410894 299 ntBASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 RPL35AP3-201ENST00000414680 288 ntBASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 MTND1P32-201ENST00000433043 938 ntBASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 AL731534.1-201ENST00000434711 269 ntBASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 RNU6-1218P-201ENST00000458990 108 ntBASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 AC073594.1-201ENST00000462065 364 ntBASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 WBP1LP4-201ENST00000505043 344 ntBASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 OR6M2P-201ENST00000529831 871 ntBASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 OR4C2P-201ENST00000530855 1064 ntBASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 AL109653.1-201ENST00000603091 248 ntBASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 AC141002.1-201ENST00000607025 279 ntBASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 AL139407.1-201ENST00000613826 1175 ntBASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 MIR193BHG-214ENST00000641765 509 ntBASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 Z99496.1-201ENST00000469424 1477 ntBASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA6Q9Y5G7 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 AC140134.1-201ENST00000511830 3544 ntBASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 Y_RNA.169-201ENST00000363745 96 ntBASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 Y_RNA.192-201ENST00000363977 102 ntBASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 RNU6-157P-201ENST00000383957 107 ntBASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 SNORA11B-201ENST00000408175 129 ntBASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 AC245060.4-201ENST00000413293 1121 ntBASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 PAICSP7-201ENST00000419829 962 ntBASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 RPS15AP30-201ENST00000420976 390 ntBASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 AC090960.1-201ENST00000421072 306 ntBASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 RPL21P43-201ENST00000425440 472 ntBASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 RPS3AP38-201ENST00000435889 763 ntBASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 RPS27AP15-201ENST00000447672 466 ntBASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 AL034418.1-201ENST00000448675 860 ntBASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 AC016027.4-201ENST00000450866 277 ntBASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 AL133217.1-201ENST00000450980 425 ntBASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 UBFD1P1-201ENST00000473259 814 ntBASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 AC012123.2-201ENST00000485809 248 ntBASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 RPF2P2-201ENST00000504693 896 ntBASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 AC109445.1-201ENST00000512356 383 ntBASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGA6Q9Y5G7 PCNAP4-201ENST00000532690 730 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms