Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 AL008729.2-201ENST00000606393 473 ntBASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 AL133406.3-201ENST00000606817 541 ntBASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 AL445222.1-201ENST00000607259 628 ntBASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 AC096586.2-201ENST00000610260 441 ntBASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 AC015813.4-201ENST00000610469 179 ntBASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 SMG1P6-201ENST00000532337 2930 ntBASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 KPNA2P2-201ENST00000419546 1489 ntBASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 IRF5P1-201ENST00000504852 2164 ntBASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 GAPDHP15-201ENST00000398586 975 ntBASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 RN7SKP278-201ENST00000410504 342 ntBASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 AC114755.2-201ENST00000413520 361 ntBASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 VN1R54P-201ENST00000435210 1049 ntBASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 AC112498.1-201ENST00000444401 332 ntBASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 TDGF1P1-201ENST00000445734 527 ntBASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 AC000111.2-201ENST00000448200 210 ntBASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 RPL23AP56-201ENST00000460778 453 ntBASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 AC010469.1-201ENST00000463864 576 ntBASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 RPL7AP10-201ENST00000481016 791 ntBASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 RPS4XP18-201ENST00000495480 763 ntBASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 RN7SL808P-201ENST00000496066 299 ntBASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 OR51K1P-201ENST00000510214 950 ntBASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 RNA5SP392-201ENST00000516905 112 ntBASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 KCTD9P6-201ENST00000522306 950 ntBASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 OR5AZ1P-201ENST00000527448 943 ntBASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 AL158196.1-201ENST00000616786 434 ntBASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 MIR7154-201ENST00000620673 73 ntBASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 MIR6719-201ENST00000622428 87 ntBASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 AC006453.5-201ENST00000636451 619 ntBASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 AL606537.1-201ENST00000607258 2011 ntBASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 MAPK10-263ENST00000641052 4307 ntBASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
TRAPPC4Q9Y296 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 AC112255.1-201ENST00000624070 2493 ntBASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 BMS1P3-201ENST00000372011 932 ntBASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 AL357515.1-201ENST00000402967 542 ntBASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 AC233289.1-201ENST00000403700 508 ntBASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 U3.35-201ENST00000408405 208 ntBASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 MTND4LP21-201ENST00000415303 295 ntBASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 TBCAP2-201ENST00000416175 326 ntBASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 AL691447.1-201ENST00000419456 387 ntBASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 AL451139.1-201ENST00000434718 346 ntBASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 TMX2P1-201ENST00000436507 708 ntBASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 PTMAP6-201ENST00000439110 327 ntBASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 RN7SL515P-201ENST00000463999 297 ntBASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 RN7SL558P-201ENST00000497468 299 ntBASIC4.38□□□□□ -1.71
TRAPPC4Q9Y296 AC113398.2-201ENST00000507630 558 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms