Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 MIR5699-201ENST00000578903 90 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AC127024.5-201ENST00000580085 462 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 RN7SL52P-201ENST00000584271 284 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AC067838.1-201ENST00000606064 577 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 RN7SL722P-201ENST00000617780 284 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 RN7SL565P-201ENST00000618246 284 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AP000346.3-201ENST00000622821 210 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AP000648.2-201ENST00000624182 404 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 AC007382.1-201ENST00000624376 2618 ntBASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 AL590240.1-201ENST00000334118 313 ntBASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 AL445213.1-201ENST00000412589 747 ntBASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 AC007738.1-201ENST00000413892 348 ntBASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 RCC2P2-201ENST00000422174 918 ntBASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 FABP7P1-201ENST00000424004 391 ntBASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 MTCO1P51-201ENST00000427672 1060 ntBASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 AC016831.4-201ENST00000438302 307 ntBASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 AL157385.1-201ENST00000446973 268 ntBASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 AC010326.1-201ENST00000462726 602 ntBASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 AC091868.1-201ENST00000508746 304 ntBASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 RNU1-6P-201ENST00000516290 144 ntBASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 RNU6-709P-201ENST00000517257 104 ntBASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 AC022784.5-201ENST00000522241 437 ntBASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 OR5AN2P-201ENST00000534535 896 ntBASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 SETP1-201ENST00000556014 845 ntBASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 TLK1P1-201ENST00000456760 2440 ntBASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.28□□□□□ -1.72
CLCF1Q9UBD9 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
CLCF1Q9UBD9 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
CLCF1Q9UBD9 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 AC007342.9-201ENST00000623877 1385 ntBASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 SAMMSON-213ENST00000641336 1521 ntBASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 ADAM5-202ENST00000399789 1942 ntBASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 THAP12P5-201ENST00000405864 2275 ntBASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 AL442639.1-201ENST00000625030 1899 ntBASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 AL035696.2-201ENST00000407941 709 ntBASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 AC002524.1-201ENST00000411687 547 ntBASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 RFESDP1-201ENST00000422350 461 ntBASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 RPL35AP21-201ENST00000437667 333 ntBASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 AL356981.1-201ENST00000454879 684 ntBASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 SEPT7P3-201ENST00000455017 621 ntBASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 GYG1P1-201ENST00000460864 698 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms