Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TM9SF3Q9HD45 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TM9SF3Q9HD45 AC011447.7-201ENST00000624228 1590 ntBASIC5.02□□□□□ -1.61
TM9SF3Q9HD45 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.02□□□□□ -1.61
TM9SF3Q9HD45 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TM9SF3Q9HD45 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.02□□□□□ -1.61
TM9SF3Q9HD45 AC007342.7-201ENST00000624610 2337 ntBASIC5.02□□□□□ -1.61
TM9SF3Q9HD45 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 RNA5SP505-201ENST00000364748 108 ntBASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 UBBP2-201ENST00000376781 231 ntBASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 EIF4A1P3-201ENST00000411521 244 ntBASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 BX323845.1-201ENST00000432417 179 ntBASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 HMGB3P9-201ENST00000441799 583 ntBASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 AC073264.2-201ENST00000448886 166 ntBASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 IGHV5-78-201ENST00000450948 295 ntBASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 AL513533.1-201ENST00000453728 415 ntBASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 CCDC75P1-201ENST00000469247 791 ntBASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 RN7SL481P-201ENST00000477764 299 ntBASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 NIP7P2-201ENST00000485801 544 ntBASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 AP006289.1-201ENST00000538089 277 ntBASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 AC087888.1-201ENST00000550884 1254 ntBASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 AC022884.2-201ENST00000578535 580 ntBASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 AC091042.1-201ENST00000579213 173 ntBASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 MIR6780A-201ENST00000615089 68 ntBASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TM9SF3Q9HD45 MUC2-202ENST00000613187 4845 ntBASIC5□□□□□ -1.61
TM9SF3Q9HD45 SMG1P4-204ENST00000523028 4131 ntBASIC5□□□□□ -1.61
TM9SF3Q9HD45 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5□□□□□ -1.61
TM9SF3Q9HD45 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
TM9SF3Q9HD45 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5□□□□□ -1.61
TM9SF3Q9HD45 MFSD8-216ENST00000641147 4009 ntBASIC5□□□□□ -1.61
TM9SF3Q9HD45 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5□□□□□ -1.61
TM9SF3Q9HD45 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TM9SF3Q9HD45 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
TM9SF3Q9HD45 RNU1-32P-201ENST00000363937 159 ntBASIC5□□□□□ -1.61
TM9SF3Q9HD45 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5□□□□□ -1.61
TM9SF3Q9HD45 FABP12P1-201ENST00000401911 322 ntBASIC5□□□□□ -1.61
TM9SF3Q9HD45 AC119751.6-201ENST00000416712 186 ntBASIC5□□□□□ -1.61
TM9SF3Q9HD45 AC073136.2-201ENST00000417282 849 ntBASIC5□□□□□ -1.61
TM9SF3Q9HD45 AF186996.5-201ENST00000418098 904 ntBASIC5□□□□□ -1.61
TM9SF3Q9HD45 MTCYBP7-201ENST00000419540 1134 ntBASIC5□□□□□ -1.61
TM9SF3Q9HD45 AC092570.3-201ENST00000420113 693 ntBASIC5□□□□□ -1.61
TM9SF3Q9HD45 AC099336.2-201ENST00000422457 254 ntBASIC5□□□□□ -1.61
TM9SF3Q9HD45 AC007559.1-201ENST00000428736 355 ntBASIC5□□□□□ -1.61
TM9SF3Q9HD45 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5□□□□□ -1.61
TM9SF3Q9HD45 AC046176.1-201ENST00000435260 1170 ntBASIC5□□□□□ -1.61
TM9SF3Q9HD45 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5□□□□□ -1.61
TM9SF3Q9HD45 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5□□□□□ -1.61
TM9SF3Q9HD45 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5□□□□□ -1.61
TM9SF3Q9HD45 SCAND3P1-201ENST00000439854 1060 ntBASIC5□□□□□ -1.61
TM9SF3Q9HD45 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5□□□□□ -1.61
TM9SF3Q9HD45 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5□□□□□ -1.61
TM9SF3Q9HD45 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5□□□□□ -1.61
TM9SF3Q9HD45 AC099560.2-201ENST00000457554 255 ntBASIC5□□□□□ -1.61
TM9SF3Q9HD45 APOOP2-201ENST00000461561 539 ntBASIC5□□□□□ -1.61
TM9SF3Q9HD45 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
TM9SF3Q9HD45 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5□□□□□ -1.61
TM9SF3Q9HD45 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5□□□□□ -1.61
TM9SF3Q9HD45 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5□□□□□ -1.61
TM9SF3Q9HD45 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5□□□□□ -1.61
TM9SF3Q9HD45 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5□□□□□ -1.61
TM9SF3Q9HD45 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5□□□□□ -1.61
TM9SF3Q9HD45 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5□□□□□ -1.61
TM9SF3Q9HD45 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5□□□□□ -1.61
TM9SF3Q9HD45 BNIP3P35-201ENST00000604530 490 ntBASIC5□□□□□ -1.61
TM9SF3Q9HD45 AP001521.2-201ENST00000608772 546 ntBASIC5□□□□□ -1.61
TM9SF3Q9HD45 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5□□□□□ -1.61
TM9SF3Q9HD45 AL731566.2-201ENST00000618971 317 ntBASIC5□□□□□ -1.61
TM9SF3Q9HD45 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms