Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC010374.1-201ENST00000503762 1237 ntBASIC5.09□□□□□ -1.59
BRF2Q9HAW0 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.09□□□□□ -1.59
BRF2Q9HAW0 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.09□□□□□ -1.59
BRF2Q9HAW0 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
BRF2Q9HAW0 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.09□□□□□ -1.59
BRF2Q9HAW0 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.09□□□□□ -1.59
BRF2Q9HAW0 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
BRF2Q9HAW0 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.09□□□□□ -1.59
BRF2Q9HAW0 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.09□□□□□ -1.59
BRF2Q9HAW0 HMGB1P40-201ENST00000525121 540 ntBASIC5.09□□□□□ -1.59
BRF2Q9HAW0 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.09□□□□□ -1.59
BRF2Q9HAW0 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.09□□□□□ -1.59
BRF2Q9HAW0 AC022404.1-201ENST00000555320 273 ntBASIC5.09□□□□□ -1.59
BRF2Q9HAW0 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.09□□□□□ -1.59
BRF2Q9HAW0 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.59
BRF2Q9HAW0 MIR4660-201ENST00000583549 74 ntBASIC5.09□□□□□ -1.59
BRF2Q9HAW0 PRPF19P1-201ENST00000584766 898 ntBASIC5.09□□□□□ -1.59
BRF2Q9HAW0 AC008521.2-201ENST00000591021 259 ntBASIC5.09□□□□□ -1.59
BRF2Q9HAW0 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.09□□□□□ -1.59
BRF2Q9HAW0 AL162431.4-201ENST00000604674 411 ntBASIC5.09□□□□□ -1.59
BRF2Q9HAW0 AC104695.2-201ENST00000605056 775 ntBASIC5.09□□□□□ -1.59
BRF2Q9HAW0 AC006946.3-201ENST00000609791 756 ntBASIC5.09□□□□□ -1.59
BRF2Q9HAW0 AL512427.1-201ENST00000618593 349 ntBASIC5.09□□□□□ -1.59
BRF2Q9HAW0 MIR8080-201ENST00000622224 89 ntBASIC5.09□□□□□ -1.59
BRF2Q9HAW0 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.09□□□□□ -1.59
BRF2Q9HAW0 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.09□□□□□ -1.59
BRF2Q9HAW0 AC126544.2-201ENST00000625174 749 ntBASIC5.09□□□□□ -1.59
BRF2Q9HAW0 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.09□□□□□ -1.59
BRF2Q9HAW0 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.09□□□□□ -1.59
BRF2Q9HAW0 AC099654.8-201ENST00000637757 681 ntBASIC5.09□□□□□ -1.59
BRF2Q9HAW0 AC074101.1-201ENST00000637861 241 ntBASIC5.09□□□□□ -1.59
BRF2Q9HAW0 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
BRF2Q9HAW0 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.09□□□□□ -1.59
BRF2Q9HAW0 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
BRF2Q9HAW0 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
BRF2Q9HAW0 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
BRF2Q9HAW0 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.09□□□□□ -1.59
BRF2Q9HAW0 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.6
BRF2Q9HAW0 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.09□□□□□ -1.6
BRF2Q9HAW0 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.09□□□□□ -1.6
BRF2Q9HAW0 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
BRF2Q9HAW0 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
BRF2Q9HAW0 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.09□□□□□ -1.6
BRF2Q9HAW0 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.6
BRF2Q9HAW0 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.08□□□□□ -1.6
BRF2Q9HAW0 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 AL133268.1-201ENST00000405676 1401 ntBASIC5.08□□□□□ -1.6
BRF2Q9HAW0 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 TMSB4XP4-201ENST00000323496 618 ntBASIC5.08□□□□□ -1.6
BRF2Q9HAW0 OR9K1P-201ENST00000326513 941 ntBASIC5.08□□□□□ -1.6
BRF2Q9HAW0 RNA5SP335-201ENST00000363817 110 ntBASIC5.08□□□□□ -1.6
BRF2Q9HAW0 RNU6-207P-201ENST00000384137 107 ntBASIC5.08□□□□□ -1.6
BRF2Q9HAW0 MIR92A2-201ENST00000385299 75 ntBASIC5.08□□□□□ -1.6
BRF2Q9HAW0 MIR1282-201ENST00000408865 101 ntBASIC5.08□□□□□ -1.6
BRF2Q9HAW0 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 PTP4A1P7-201ENST00000423476 514 ntBASIC5.08□□□□□ -1.6
BRF2Q9HAW0 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 RPS29P14-201ENST00000431518 171 ntBASIC5.08□□□□□ -1.6
BRF2Q9HAW0 AP000281.1-201ENST00000444036 316 ntBASIC5.08□□□□□ -1.6
BRF2Q9HAW0 HSFY3P-201ENST00000444242 1191 ntBASIC5.08□□□□□ -1.6
BRF2Q9HAW0 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 OR52E7P-201ENST00000452394 933 ntBASIC5.08□□□□□ -1.6
BRF2Q9HAW0 RPL21P18-201ENST00000469899 480 ntBASIC5.08□□□□□ -1.6
BRF2Q9HAW0 TRBV8-2-201ENST00000475637 270 ntBASIC5.08□□□□□ -1.6
BRF2Q9HAW0 AL161747.1-201ENST00000480068 358 ntBASIC5.08□□□□□ -1.6
BRF2Q9HAW0 RN7SL273P-201ENST00000481561 299 ntBASIC5.08□□□□□ -1.6
BRF2Q9HAW0 PPIAP19-201ENST00000486414 492 ntBASIC5.08□□□□□ -1.6
BRF2Q9HAW0 AC104108.1-201ENST00000509930 412 ntBASIC5.08□□□□□ -1.6
BRF2Q9HAW0 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 AC138832.1-201ENST00000522871 556 ntBASIC5.08□□□□□ -1.6
BRF2Q9HAW0 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 AL121594.4-201ENST00000556211 1196 ntBASIC5.08□□□□□ -1.6
BRF2Q9HAW0 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 AC011492.1-201ENST00000600023 315 ntBASIC5.08□□□□□ -1.6
BRF2Q9HAW0 AC096553.1-201ENST00000605169 829 ntBASIC5.08□□□□□ -1.6
BRF2Q9HAW0 AC243654.2-201ENST00000612843 443 ntBASIC5.08□□□□□ -1.6
BRF2Q9HAW0 AC116447.1-201ENST00000613153 453 ntBASIC5.08□□□□□ -1.6
BRF2Q9HAW0 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BRF2Q9HAW0 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms