Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
UPF2Q9HAU5 MIR5699-201ENST00000578903 90 ntBASIC5.7□□□□□ -1.5
UPF2Q9HAU5 MIR4691-201ENST00000583764 85 ntBASIC5.7□□□□□ -1.5
UPF2Q9HAU5 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.7□□□□□ -1.5
UPF2Q9HAU5 MEMO1P5-201ENST00000604810 406 ntBASIC5.7□□□□□ -1.5
UPF2Q9HAU5 AC073137.1-201ENST00000605636 634 ntBASIC5.7□□□□□ -1.5
UPF2Q9HAU5 AP001521.2-201ENST00000608772 546 ntBASIC5.7□□□□□ -1.5
UPF2Q9HAU5 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.7□□□□□ -1.5
UPF2Q9HAU5 AC079298.2-201ENST00000623885 459 ntBASIC5.7□□□□□ -1.5
UPF2Q9HAU5 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
UPF2Q9HAU5 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
UPF2Q9HAU5 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
UPF2Q9HAU5 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
UPF2Q9HAU5 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
UPF2Q9HAU5 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
UPF2Q9HAU5 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
UPF2Q9HAU5 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
UPF2Q9HAU5 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
UPF2Q9HAU5 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
UPF2Q9HAU5 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
UPF2Q9HAU5 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
UPF2Q9HAU5 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
UPF2Q9HAU5 AL589826.1-201ENST00000340697 249 ntBASIC5.69□□□□□ -1.5
UPF2Q9HAU5 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
UPF2Q9HAU5 RN7SKP216-201ENST00000411050 312 ntBASIC5.69□□□□□ -1.5
UPF2Q9HAU5 NPM1P4-201ENST00000414095 812 ntBASIC5.69□□□□□ -1.5
UPF2Q9HAU5 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.69□□□□□ -1.5
UPF2Q9HAU5 CYCSP10-201ENST00000417973 294 ntBASIC5.69□□□□□ -1.5
UPF2Q9HAU5 HMGB1P32-201ENST00000425971 565 ntBASIC5.69□□□□□ -1.5
UPF2Q9HAU5 RPL21P91-201ENST00000429231 479 ntBASIC5.69□□□□□ -1.5
UPF2Q9HAU5 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.69□□□□□ -1.5
UPF2Q9HAU5 AC234781.3-201ENST00000452540 973 ntBASIC5.69□□□□□ -1.5
UPF2Q9HAU5 AC089999.1-201ENST00000460336 374 ntBASIC5.69□□□□□ -1.5
UPF2Q9HAU5 RWDD4P1-201ENST00000488019 565 ntBASIC5.69□□□□□ -1.5
UPF2Q9HAU5 AK4P6-201ENST00000505168 528 ntBASIC5.69□□□□□ -1.5
UPF2Q9HAU5 AC113398.2-201ENST00000507630 558 ntBASIC5.69□□□□□ -1.5
UPF2Q9HAU5 AC025857.1-201ENST00000525252 377 ntBASIC5.69□□□□□ -1.5
UPF2Q9HAU5 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.69□□□□□ -1.5
UPF2Q9HAU5 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
UPF2Q9HAU5 AC234775.3-201ENST00000564612 656 ntBASIC5.69□□□□□ -1.5
UPF2Q9HAU5 AL121834.1-201ENST00000572284 509 ntBASIC5.69□□□□□ -1.5
UPF2Q9HAU5 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
UPF2Q9HAU5 AC087468.1-201ENST00000604365 630 ntBASIC5.69□□□□□ -1.5
UPF2Q9HAU5 AL023583.1-201ENST00000607518 1143 ntBASIC5.69□□□□□ -1.5
UPF2Q9HAU5 AC007497.1-201ENST00000610421 561 ntBASIC5.69□□□□□ -1.5
UPF2Q9HAU5 AC003001.2-201ENST00000616294 831 ntBASIC5.69□□□□□ -1.5
UPF2Q9HAU5 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.69□□□□□ -1.5
UPF2Q9HAU5 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
UPF2Q9HAU5 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
UPF2Q9HAU5 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.69□□□□□ -1.5
UPF2Q9HAU5 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.69□□□□□ -1.5
UPF2Q9HAU5 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
UPF2Q9HAU5 AC087190.4-201ENST00000574616 8334 ntBASIC5.69□□□□□ -1.5
UPF2Q9HAU5 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
UPF2Q9HAU5 LINC01109-201ENST00000603837 3081 ntBASIC5.68□□□□□ -1.5
UPF2Q9HAU5 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
UPF2Q9HAU5 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.68□□□□□ -1.5
UPF2Q9HAU5 MTHFD2P5-201ENST00000320415 844 ntBASIC5.68□□□□□ -1.5
UPF2Q9HAU5 RNA5SP28-201ENST00000363841 119 ntBASIC5.68□□□□□ -1.5
UPF2Q9HAU5 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
UPF2Q9HAU5 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.68□□□□□ -1.5
UPF2Q9HAU5 GTF2IP2-201ENST00000424290 697 ntBASIC5.68□□□□□ -1.5
UPF2Q9HAU5 RHOT1P3-201ENST00000436571 331 ntBASIC5.68□□□□□ -1.5
UPF2Q9HAU5 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.68□□□□□ -1.5
UPF2Q9HAU5 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.68□□□□□ -1.5
UPF2Q9HAU5 RPL7AP28-201ENST00000464513 571 ntBASIC5.68□□□□□ -1.5
UPF2Q9HAU5 AC104109.1-201ENST00000498563 436 ntBASIC5.68□□□□□ -1.5
UPF2Q9HAU5 AC098799.3-201ENST00000506095 438 ntBASIC5.68□□□□□ -1.5
UPF2Q9HAU5 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.68□□□□□ -1.5
UPF2Q9HAU5 RNA5SP446-201ENST00000515955 82 ntBASIC5.68□□□□□ -1.5
UPF2Q9HAU5 KCTD9P6-201ENST00000522306 950 ntBASIC5.68□□□□□ -1.5
UPF2Q9HAU5 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UPF2Q9HAU5 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.68□□□□□ -1.5
UPF2Q9HAU5 MTND6P33-201ENST00000571794 183 ntBASIC5.68□□□□□ -1.5
UPF2Q9HAU5 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.68□□□□□ -1.5
UPF2Q9HAU5 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.68□□□□□ -1.5
UPF2Q9HAU5 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.68□□□□□ -1.5
UPF2Q9HAU5 AC022726.1-201ENST00000587475 207 ntBASIC5.68□□□□□ -1.5
UPF2Q9HAU5 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.68□□□□□ -1.5
UPF2Q9HAU5 AC245128.3-201ENST00000594721 748 ntBASIC5.68□□□□□ -1.5
UPF2Q9HAU5 AL162574.2-201ENST00000614618 657 ntBASIC5.68□□□□□ -1.5
UPF2Q9HAU5 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.68□□□□□ -1.5
UPF2Q9HAU5 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.68□□□□□ -1.5
UPF2Q9HAU5 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.68□□□□□ -1.5
UPF2Q9HAU5 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
UPF2Q9HAU5 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
UPF2Q9HAU5 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
UPF2Q9HAU5 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
UPF2Q9HAU5 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UPF2Q9HAU5 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 RNU1-82P-201ENST00000390851 165 ntBASIC5.67□□□□□ -1.5
UPF2Q9HAU5 CENPIP1-201ENST00000425713 902 ntBASIC5.67□□□□□ -1.5
UPF2Q9HAU5 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
UPF2Q9HAU5 TMX2P1-201ENST00000436507 708 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms