Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC012512.1-201ENST00000446594 718 ntBASIC5.39□□□□□ -1.55
EBF3Q9H4W6 RPL31P44-201ENST00000447680 377 ntBASIC5.39□□□□□ -1.55
EBF3Q9H4W6 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.39□□□□□ -1.55
EBF3Q9H4W6 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.39□□□□□ -1.55
EBF3Q9H4W6 DUXAP8-207ENST00000456786 622 ntBASIC5.39□□□□□ -1.55
EBF3Q9H4W6 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.39□□□□□ -1.55
EBF3Q9H4W6 METTL15P1-201ENST00000481421 1045 ntBASIC5.39□□□□□ -1.55
EBF3Q9H4W6 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.39□□□□□ -1.55
EBF3Q9H4W6 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.39□□□□□ -1.55
EBF3Q9H4W6 PRELID3BP6-201ENST00000503839 571 ntBASIC5.39□□□□□ -1.55
EBF3Q9H4W6 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.39□□□□□ -1.55
EBF3Q9H4W6 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.39□□□□□ -1.55
EBF3Q9H4W6 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.39□□□□□ -1.55
EBF3Q9H4W6 AC091912.1-201ENST00000511351 248 ntBASIC5.39□□□□□ -1.55
EBF3Q9H4W6 AC112673.1-201ENST00000513168 575 ntBASIC5.39□□□□□ -1.55
EBF3Q9H4W6 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.39□□□□□ -1.55
EBF3Q9H4W6 AC092593.2-201ENST00000513866 913 ntBASIC5.39□□□□□ -1.55
EBF3Q9H4W6 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.39□□□□□ -1.55
EBF3Q9H4W6 RNU6-491P-201ENST00000516099 110 ntBASIC5.39□□□□□ -1.55
EBF3Q9H4W6 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.39□□□□□ -1.55
EBF3Q9H4W6 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.39□□□□□ -1.55
EBF3Q9H4W6 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.39□□□□□ -1.55
EBF3Q9H4W6 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
EBF3Q9H4W6 AC027281.1-201ENST00000574178 758 ntBASIC5.39□□□□□ -1.55
EBF3Q9H4W6 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.39□□□□□ -1.55
EBF3Q9H4W6 MIR4472-2-201ENST00000582069 67 ntBASIC5.39□□□□□ -1.55
EBF3Q9H4W6 MIR7853-201ENST00000584820 132 ntBASIC5.39□□□□□ -1.55
EBF3Q9H4W6 MTATP6P2-201ENST00000603319 678 ntBASIC5.39□□□□□ -1.55
EBF3Q9H4W6 AL022161.1-201ENST00000604390 213 ntBASIC5.39□□□□□ -1.55
EBF3Q9H4W6 AC012557.2-201ENST00000605919 418 ntBASIC5.39□□□□□ -1.55
EBF3Q9H4W6 AL450270.1-201ENST00000606160 391 ntBASIC5.39□□□□□ -1.55
EBF3Q9H4W6 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.39□□□□□ -1.55
EBF3Q9H4W6 AC244107.2-201ENST00000611773 76 ntBASIC5.39□□□□□ -1.55
EBF3Q9H4W6 DUXAP10-204ENST00000612052 616 ntBASIC5.39□□□□□ -1.55
EBF3Q9H4W6 AC079395.3-201ENST00000615161 484 ntBASIC5.39□□□□□ -1.55
EBF3Q9H4W6 AP000676.4-201ENST00000624659 623 ntBASIC5.39□□□□□ -1.55
EBF3Q9H4W6 AP003400.3-201ENST00000624904 346 ntBASIC5.39□□□□□ -1.55
EBF3Q9H4W6 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.39□□□□□ -1.55
EBF3Q9H4W6 AC025574.1-201ENST00000554784 1653 ntBASIC5.39□□□□□ -1.55
EBF3Q9H4W6 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.39□□□□□ -1.55
EBF3Q9H4W6 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.39□□□□□ -1.55
EBF3Q9H4W6 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.39□□□□□ -1.55
EBF3Q9H4W6 AC079097.1-201ENST00000512187 1399 ntBASIC5.39□□□□□ -1.55
EBF3Q9H4W6 AC097063.1-201ENST00000426714 1797 ntBASIC5.39□□□□□ -1.55
EBF3Q9H4W6 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
EBF3Q9H4W6 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AC092681.1-201ENST00000297369 291 ntBASIC5.38□□□□□ -1.55
EBF3Q9H4W6 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 PPIAP9-201ENST00000403866 498 ntBASIC5.38□□□□□ -1.55
EBF3Q9H4W6 NUDT19P3-201ENST00000404698 555 ntBASIC5.38□□□□□ -1.55
EBF3Q9H4W6 MIR1182-201ENST00000408363 97 ntBASIC5.38□□□□□ -1.55
EBF3Q9H4W6 NPM1P40-201ENST00000412758 733 ntBASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AC096644.3-201ENST00000416788 338 ntBASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 UBE2D3P3-201ENST00000426992 425 ntBASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 RPS29P10-201ENST00000439197 166 ntBASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AL161722.1-201ENST00000446972 1032 ntBASIC5.38□□□□□ -1.55
EBF3Q9H4W6 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AC245028.2-201ENST00000458673 253 ntBASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AC007686.1-201ENST00000488511 463 ntBASIC5.38□□□□□ -1.55
EBF3Q9H4W6 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 ASNSP4-201ENST00000511103 447 ntBASIC5.38□□□□□ -1.55
EBF3Q9H4W6 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AC079064.1-201ENST00000528365 362 ntBASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 CR383656.6-201ENST00000550518 394 ntBASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AC127024.5-201ENST00000580085 462 ntBASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 ZNF92P3-201ENST00000596594 954 ntBASIC5.38□□□□□ -1.55
EBF3Q9H4W6 DUXAP3-201ENST00000603616 594 ntBASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AC005084.1-201ENST00000605160 304 ntBASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AC080013.6-201ENST00000606185 215 ntBASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AL355493.4-201ENST00000618530 292 ntBASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AC097460.3-201ENST00000623099 442 ntBASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AC126544.2-201ENST00000625174 749 ntBASIC5.38□□□□□ -1.55
EBF3Q9H4W6 AC135068.12-201ENST00000637370 931 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms