Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 HMGB1P11-201ENST00000413899 637 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 AC008267.5-201ENST00000424928 265 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 DSTNP5-201ENST00000427921 523 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 RPL36AP53-201ENST00000432891 316 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 Z83313.1-201ENST00000433780 718 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 CACYBPP1-201ENST00000438592 684 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 AL772161.1-201ENST00000439130 476 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 IGKV1OR2-2-201ENST00000451163 355 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 MTCO3P10-201ENST00000455912 772 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 MRPS35P2-201ENST00000508242 191 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 KCTD9P2-201ENST00000512203 1013 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 Y_RNA.667-201ENST00000516212 107 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 RNU6-835P-201ENST00000516974 104 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 RNU6-988P-201ENST00000519081 107 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 AL390838.2-201ENST00000602394 274 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 AC008782.1-201ENST00000603386 430 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 AC007938.3-201ENST00000604965 623 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 AP000654.2-201ENST00000605633 586 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 AC011816.2-201ENST00000607089 556 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 AC005014.2-201ENST00000607795 599 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 AC084781.2-201ENST00000615568 161 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 AL356585.4-201ENST00000623078 1229 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 NELL1-201ENST00000298925 3329 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 CD46-209ENST00000367047 3089 ntTSL 5 BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 AC078795.1-201ENST00000602342 3143 ntBASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 NECAP1-210ENST00000638237 2517 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 SMARCA1-203ENST00000371123 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 LIMK2-201ENST00000331728 3670 ntAPPRIS P4 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 UGT2B24P-201ENST00000514441 1597 ntBASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 LIG4-204ENST00000611712 4180 ntAPPRIS P1 TSL 4 BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 Y_RNA.197-201ENST00000364004 102 ntBASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 RNY4P34-201ENST00000364779 95 ntBASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 RNU6-723P-201ENST00000383973 107 ntBASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 SNORD65-201ENST00000391079 73 ntBASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 RNA5SP474-201ENST00000391234 90 ntBASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 RNU6-985P-201ENST00000410182 104 ntBASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 RNU6-195P-201ENST00000411352 109 ntBASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 AC010385.1-201ENST00000412374 256 ntBASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 SNRPFP1-201ENST00000414761 252 ntBASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 ELOCP4-201ENST00000420090 333 ntBASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 RPL23AP28-201ENST00000448062 470 ntBASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 AC036111.2-201ENST00000533247 901 ntBASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 AC079600.1-201ENST00000550326 297 ntBASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 SNRPGP18-201ENST00000553000 214 ntBASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 AC007956.1-201ENST00000555623 542 ntBASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 MIR4742-201ENST00000581069 85 ntBASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 DISC2.1-201ENST00000612827 205 ntBASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 AP001264.1-201ENST00000620602 703 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms