Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AL121657.1-201ENST00000327215 531 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 RNA5SP65-201ENST00000363166 119 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AL389915.1-201ENST00000422463 466 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AC083862.1-201ENST00000427378 1242 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 TCEA1P3-201ENST00000443005 880 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 TVP23CP1-201ENST00000450317 639 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 APOOP2-201ENST00000461561 539 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 RPL30P9-201ENST00000465586 330 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AC087879.1-201ENST00000474343 374 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AP000893.1-201ENST00000474462 794 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AC068522.1-201ENST00000482895 345 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 RPL37P23-201ENST00000492641 294 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 H3F3AP3-201ENST00000497682 407 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AC004069.2-201ENST00000505438 1114 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 APOBEC3AP1-201ENST00000511396 287 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AC018797.3-201ENST00000513388 1241 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 IGLVVI-25-1-201ENST00000521893 249 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AL389895.1-201ENST00000554127 252 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AC026826.3-201ENST00000561747 158 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AC136618.2-201ENST00000575091 400 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AC078899.5-201ENST00000612475 178 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AC010678.1-201ENST00000614118 713 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 MIR6864-201ENST00000617935 70 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AK6-205ENST00000618980 483 ntTSL 2 BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AC073593.1-201ENST00000624500 411 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AL121936.2-201ENST00000641935 662 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AC005034.3-201ENST00000604845 1747 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 PABPC1P9-201ENST00000426076 1612 ntBASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 AC092104.1-201ENST00000497346 1441 ntBASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 AC087752.1-201ENST00000391360 558 ntBASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 MIR1275-201ENST00000408770 80 ntBASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 COX6CP15-201ENST00000426313 211 ntBASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 AL365184.2-201ENST00000431139 435 ntBASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 TRGVB-201ENST00000453257 471 ntBASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 TRBV26-201ENST00000456572 344 ntBASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 RN7SL170P-201ENST00000487098 295 ntBASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 AC021006.1-201ENST00000489849 553 ntBASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 AC063943.2-201ENST00000495697 534 ntBASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 AC018797.1-201ENST00000510791 255 ntBASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 AC092375.1-201ENST00000550410 637 ntBASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 AC063949.1-201ENST00000552900 865 ntBASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 CFL2-206ENST00000556161 546 ntTSL 4 BASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 AGGF1P4-201ENST00000568249 801 ntBASIC7.19□□□□□ -1.26
TRAIPQ9BWF2 MIR3154-201ENST00000577829 84 ntBASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms