Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PHOX2BQ99453 CR381572.1-201ENST00000625098 102 ntBASIC7.64□□□□□ -1.19
PHOX2BQ99453 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC7.64□□□□□ -1.19
PHOX2BQ99453 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PHOX2BQ99453 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC7.64□□□□□ -1.19
PHOX2BQ99453 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
PHOX2BQ99453 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PHOX2BQ99453 CPB2-AS1-204ENST00000606991 3218 ntTSL 2 BASIC7.64□□□□□ -1.19
PHOX2BQ99453 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PHOX2BQ99453 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
PHOX2BQ99453 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PHOX2BQ99453 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
PHOX2BQ99453 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
PHOX2BQ99453 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC7.64□□□□□ -1.19
PHOX2BQ99453 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
PHOX2BQ99453 AC009166.2-201ENST00000624410 2833 ntBASIC7.64□□□□□ -1.19
PHOX2BQ99453 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
PHOX2BQ99453 MXRA7-207ENST00000592148 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
PHOX2BQ99453 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PHOX2BQ99453 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PHOX2BQ99453 AC007485.2-201ENST00000623493 1667 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PHOX2BQ99453 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PHOX2BQ99453 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PHOX2BQ99453 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 AC015871.3-201ENST00000618835 2261 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
PHOX2BQ99453 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PHOX2BQ99453 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
PHOX2BQ99453 AL357556.1-201ENST00000421884 1388 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PHOX2BQ99453 AL589642.1-201ENST00000430787 2582 ntTSL 2 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 RNU4-48P-201ENST00000365559 182 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 MIR514A2-201ENST00000385131 88 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 MIR514A3-201ENST00000385132 88 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 RNU6-1106P-201ENST00000390845 107 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 CISD1P1-201ENST00000393907 327 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 AC017078.1-201ENST00000416146 368 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 AC113618.1-201ENST00000416747 285 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PHOX2BQ99453 RPS15AP30-201ENST00000420976 390 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 MTCYBP9-201ENST00000431021 303 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 AL731534.1-201ENST00000434711 269 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 AC244102.1-201ENST00000437309 848 ntTSL 3 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 AL137074.1-201ENST00000442640 465 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 AC073415.1-201ENST00000449240 153 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 AL034369.1-201ENST00000453808 477 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 BTF3P15-201ENST00000455606 336 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 VN1R17P-201ENST00000472048 1090 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 AC024558.1-201ENST00000505008 528 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 RNU4ATAC8P-201ENST00000516196 109 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 AC091982.1-201ENST00000518134 520 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 RPL10P19-201ENST00000519013 301 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PHOX2BQ99453 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PHOX2BQ99453 OR7E96P-201ENST00000530816 976 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 OR7E87P-201ENST00000532397 929 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 DNM1P33-201ENST00000565222 270 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 MT1L-202ENST00000566367 78 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 AL356432.3-201ENST00000568952 465 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 AL353997.4-201ENST00000586196 166 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 JAML-213ENST00000640745 951 ntTSL 5 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.63□□□□□ -1.19
PHOX2BQ99453 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PHOX2BQ99453 HTR2A-201ENST00000378688 4835 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PHOX2BQ99453 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PHOX2BQ99453 AC009948.3-201ENST00000603415 1798 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
PHOX2BQ99453 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
PHOX2BQ99453 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PHOX2BQ99453 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PHOX2BQ99453 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 AC090220.1-201ENST00000593078 1699 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PHOX2BQ99453 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 HYDIN2-203ENST00000614586 13885 ntBASIC7.63□□□□□ -1.19
PHOX2BQ99453 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
PHOX2BQ99453 PPFIA2-204ENST00000541017 4192 ntTSL 2 BASIC7.63□□□□□ -1.19
PHOX2BQ99453 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms