Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 Z98745.1-201ENST00000402553 494 ntBASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 RPL21P67-201ENST00000402896 478 ntBASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 RPL23AP38-201ENST00000423801 469 ntBASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 RPL23AP43-201ENST00000446445 471 ntBASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 CAB39P1-201ENST00000502277 460 ntBASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 AC093249.4-201ENST00000564755 259 ntBASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 AL445363.3-201ENST00000623080 671 ntBASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 TMEM30CP-203ENST00000637814 1035 ntBASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC3.78□□□□□ -1.81
CSMD1Q96PZ7 ANAPC1P1-201ENST00000426186 2145 ntBASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 AP001157.1-201ENST00000550837 2339 ntBASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 Y_RNA.510-201ENST00000384511 114 ntBASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 PPIAP3-201ENST00000450588 505 ntBASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 PYM1-205ENST00000547925 499 ntTSL 3 BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 Y_RNA.500-201ENST00000384466 111 ntBASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 U8.11-201ENST00000384699 133 ntBASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 U8.12-201ENST00000384701 133 ntBASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 AL390879.2-203ENST00000426943 1121 ntBASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 RPL7P28-201ENST00000437739 740 ntBASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 NOTCH2P1-201ENST00000443481 624 ntBASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 U8.18-201ENST00000459285 133 ntBASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 RPS29P2-201ENST00000479278 136 ntBASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 CDH12P2-201ENST00000504393 298 ntBASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 RNA5SP49-201ENST00000516450 115 ntBASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 AC135352.1-201ENST00000506173 1418 ntBASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 LARP1BP1-201ENST00000506036 1359 ntBASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 ATP5F1P4-201ENST00000397288 746 ntBASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 AC099669.2-201ENST00000616549 437 ntBASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 MIR7151-201ENST00000617477 60 ntBASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
CSMD1Q96PZ7 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 RNA5SP223-201ENST00000365174 120 ntBASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 RAB9AP3-201ENST00000412737 573 ntBASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 AC023271.1-201ENST00000445936 1090 ntBASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 RAB9AP1-201ENST00000449393 573 ntBASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 AC006499.5-201ENST00000505037 514 ntBASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 SNORA74C-1-201ENST00000580726 201 ntBASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 AP005019.3-201ENST00000620418 560 ntBASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 EIF2AP4-201ENST00000424793 1781 ntBASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 RNA5SP22-201ENST00000365393 109 ntBASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 OR1F12-201ENST00000402365 945 ntBASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 QRSL1P2-201ENST00000418582 964 ntBASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.76□□□□□ -1.81
CSMD1Q96PZ7 RGS17P1-201ENST00000423358 553 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms