Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
AP1S3Q96PC3 KARSP3-201ENST00000571212 1504 ntBASIC3.55□□□□□ -1.84
AP1S3Q96PC3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
AP1S3Q96PC3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
AP1S3Q96PC3 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
AP1S3Q96PC3 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
AP1S3Q96PC3 RNA5SP52-201ENST00000362448 134 ntBASIC3.55□□□□□ -1.84
AP1S3Q96PC3 SNORA17.1-201ENST00000362945 126 ntBASIC3.55□□□□□ -1.84
AP1S3Q96PC3 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
AP1S3Q96PC3 SNORA70-201ENST00000384436 135 ntBASIC3.55□□□□□ -1.84
AP1S3Q96PC3 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
AP1S3Q96PC3 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
AP1S3Q96PC3 RN7SKP126-201ENST00000411143 300 ntBASIC3.55□□□□□ -1.84
AP1S3Q96PC3 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC3.55□□□□□ -1.84
AP1S3Q96PC3 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC3.55□□□□□ -1.84
AP1S3Q96PC3 AC099336.2-201ENST00000422457 254 ntBASIC3.55□□□□□ -1.84
AP1S3Q96PC3 AL391219.1-201ENST00000422570 483 ntBASIC3.55□□□□□ -1.84
AP1S3Q96PC3 RPS26P47-201ENST00000427219 348 ntBASIC3.55□□□□□ -1.84
AP1S3Q96PC3 RPL23AP19-201ENST00000436229 369 ntBASIC3.55□□□□□ -1.84
AP1S3Q96PC3 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.55□□□□□ -1.84
AP1S3Q96PC3 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.55□□□□□ -1.84
AP1S3Q96PC3 EEF1A1P1-201ENST00000447052 739 ntBASIC3.55□□□□□ -1.84
AP1S3Q96PC3 AC099560.2-201ENST00000457554 255 ntBASIC3.55□□□□□ -1.84
AP1S3Q96PC3 AC084754.1-201ENST00000463466 464 ntBASIC3.55□□□□□ -1.84
AP1S3Q96PC3 AC105918.1-201ENST00000474399 838 ntBASIC3.55□□□□□ -1.84
AP1S3Q96PC3 SYT14P1-201ENST00000481459 721 ntBASIC3.55□□□□□ -1.84
AP1S3Q96PC3 AC116562.1-201ENST00000485355 781 ntBASIC3.55□□□□□ -1.84
AP1S3Q96PC3 RN7SL466P-201ENST00000497546 295 ntBASIC3.55□□□□□ -1.84
AP1S3Q96PC3 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC3.55□□□□□ -1.84
AP1S3Q96PC3 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.55□□□□□ -1.84
AP1S3Q96PC3 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.55□□□□□ -1.84
AP1S3Q96PC3 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC3.55□□□□□ -1.84
AP1S3Q96PC3 AC068446.3-201ENST00000555285 382 ntBASIC3.55□□□□□ -1.84
AP1S3Q96PC3 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.55□□□□□ -1.84
AP1S3Q96PC3 AC079075.1-201ENST00000559543 878 ntBASIC3.55□□□□□ -1.84
AP1S3Q96PC3 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
AP1S3Q96PC3 AL139395.1-201ENST00000603662 160 ntBASIC3.55□□□□□ -1.84
AP1S3Q96PC3 AC091979.2-201ENST00000607514 214 ntBASIC3.55□□□□□ -1.84
AP1S3Q96PC3 AC078899.5-201ENST00000612475 178 ntBASIC3.55□□□□□ -1.84
AP1S3Q96PC3 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC3.55□□□□□ -1.84
AP1S3Q96PC3 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC3.55□□□□□ -1.84
AP1S3Q96PC3 AL121873.1-201ENST00000616013 524 ntBASIC3.55□□□□□ -1.84
AP1S3Q96PC3 MIR7154-201ENST00000620673 73 ntBASIC3.55□□□□□ -1.84
AP1S3Q96PC3 AC243960.7-201ENST00000623532 707 ntBASIC3.55□□□□□ -1.84
AP1S3Q96PC3 AC006453.5-201ENST00000636451 619 ntBASIC3.55□□□□□ -1.84
AP1S3Q96PC3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
AP1S3Q96PC3 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC3.55□□□□□ -1.84
AP1S3Q96PC3 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
AP1S3Q96PC3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
AP1S3Q96PC3 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
AP1S3Q96PC3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
AP1S3Q96PC3 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 RNU1-83P-201ENST00000363426 164 ntBASIC3.54□□□□□ -1.84
AP1S3Q96PC3 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 NCSTNP1-201ENST00000406229 144 ntBASIC3.54□□□□□ -1.84
AP1S3Q96PC3 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 VN1R37P-201ENST00000419096 748 ntBASIC3.54□□□□□ -1.84
AP1S3Q96PC3 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 HMGB3P10-201ENST00000434734 572 ntBASIC3.54□□□□□ -1.84
AP1S3Q96PC3 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 AC104651.2-201ENST00000447549 528 ntBASIC3.54□□□□□ -1.84
AP1S3Q96PC3 TCEA1P1-201ENST00000449716 880 ntBASIC3.54□□□□□ -1.84
AP1S3Q96PC3 IGHV5-78-201ENST00000450948 295 ntBASIC3.54□□□□□ -1.84
AP1S3Q96PC3 AC007386.1-201ENST00000455212 582 ntBASIC3.54□□□□□ -1.84
AP1S3Q96PC3 PSMC1P13-201ENST00000458195 985 ntBASIC3.54□□□□□ -1.84
AP1S3Q96PC3 RPL7P39-201ENST00000481157 744 ntBASIC3.54□□□□□ -1.84
AP1S3Q96PC3 PFN1P8-201ENST00000497012 543 ntBASIC3.54□□□□□ -1.84
AP1S3Q96PC3 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 AC022826.1-201ENST00000519383 805 ntBASIC3.54□□□□□ -1.84
AP1S3Q96PC3 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 AL049779.2-201ENST00000553847 315 ntBASIC3.54□□□□□ -1.84
AP1S3Q96PC3 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 AC087477.6-201ENST00000559595 843 ntBASIC3.54□□□□□ -1.84
AP1S3Q96PC3 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 AC027243.2-201ENST00000602530 724 ntBASIC3.54□□□□□ -1.84
AP1S3Q96PC3 QTRT1P1-201ENST00000604344 1078 ntBASIC3.54□□□□□ -1.84
AP1S3Q96PC3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.54□□□□□ -1.84
AP1S3Q96PC3 AC005377.1-201ENST00000605126 456 ntBASIC3.54□□□□□ -1.84
AP1S3Q96PC3 AC009779.8-202ENST00000607990 932 ntBASIC3.54□□□□□ -1.84
AP1S3Q96PC3 MIR6780B-201ENST00000610307 79 ntBASIC3.54□□□□□ -1.84
AP1S3Q96PC3 AC109309.2-201ENST00000612597 332 ntBASIC3.54□□□□□ -1.84
AP1S3Q96PC3 AC016542.2-201ENST00000624201 619 ntBASIC3.54□□□□□ -1.84
AP1S3Q96PC3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms