Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC42Q96M95 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC42Q96M95 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CCDC42Q96M95 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC42Q96M95 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC42Q96M95 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC42Q96M95 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CCDC42Q96M95 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC42Q96M95 RNU1-94P-201ENST00000362627 173 ntBASIC4.93□□□□□ -1.62
CCDC42Q96M95 MIR765-201ENST00000390226 114 ntBASIC4.93□□□□□ -1.62
CCDC42Q96M95 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CCDC42Q96M95 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC42Q96M95 AC097523.2-201ENST00000435551 652 ntBASIC4.93□□□□□ -1.62
CCDC42Q96M95 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC42Q96M95 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC42Q96M95 RPS27AP15-201ENST00000447672 466 ntBASIC4.93□□□□□ -1.62
CCDC42Q96M95 TRY2P-201ENST00000448860 689 ntBASIC4.93□□□□□ -1.62
CCDC42Q96M95 AC108463.1-201ENST00000450258 347 ntBASIC4.93□□□□□ -1.62
CCDC42Q96M95 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC42Q96M95 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC42Q96M95 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC42Q96M95 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC42Q96M95 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC42Q96M95 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.93□□□□□ -1.62
CCDC42Q96M95 BTF3P13-201ENST00000513224 490 ntBASIC4.93□□□□□ -1.62
CCDC42Q96M95 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.93□□□□□ -1.62
CCDC42Q96M95 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC42Q96M95 AL358913.1-201ENST00000554342 121 ntBASIC4.93□□□□□ -1.62
CCDC42Q96M95 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC42Q96M95 SUMO2P15-201ENST00000604285 278 ntBASIC4.93□□□□□ -1.62
CCDC42Q96M95 AC104118.1-201ENST00000607625 1589 ntBASIC4.93□□□□□ -1.62
CCDC42Q96M95 AC022467.1-201ENST00000614738 749 ntBASIC4.93□□□□□ -1.62
CCDC42Q96M95 LINC00901.1-201ENST00000617252 152 ntBASIC4.93□□□□□ -1.62
CCDC42Q96M95 AP002799.1-201ENST00000623552 423 ntBASIC4.93□□□□□ -1.62
CCDC42Q96M95 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC42Q96M95 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC42Q96M95 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC42Q96M95 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC42Q96M95 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.93□□□□□ -1.62
CCDC42Q96M95 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC42Q96M95 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC42Q96M95 VN2R3P-201ENST00000422626 1412 ntBASIC4.92□□□□□ -1.62
CCDC42Q96M95 RN7SKP224-201ENST00000364140 325 ntBASIC4.92□□□□□ -1.62
CCDC42Q96M95 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC42Q96M95 RNU1-44P-201ENST00000384453 163 ntBASIC4.92□□□□□ -1.62
CCDC42Q96M95 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CCDC42Q96M95 CENPIP1-201ENST00000425713 902 ntBASIC4.92□□□□□ -1.62
CCDC42Q96M95 EEF1B2P5-201ENST00000444820 548 ntBASIC4.92□□□□□ -1.62
CCDC42Q96M95 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.92□□□□□ -1.62
CCDC42Q96M95 OR52J1P-201ENST00000450596 932 ntBASIC4.92□□□□□ -1.62
CCDC42Q96M95 AL356390.1-201ENST00000455684 397 ntBASIC4.92□□□□□ -1.62
CCDC42Q96M95 EIF2S2P5-201ENST00000457635 968 ntBASIC4.92□□□□□ -1.62
CCDC42Q96M95 AC008897.1-201ENST00000494006 347 ntBASIC4.92□□□□□ -1.62
CCDC42Q96M95 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC42Q96M95 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC42Q96M95 OR10G5P-201ENST00000532733 358 ntBASIC4.92□□□□□ -1.62
CCDC42Q96M95 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC42Q96M95 AC008033.2-201ENST00000542626 177 ntBASIC4.92□□□□□ -1.62
CCDC42Q96M95 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC42Q96M95 DYNLL1P4-201ENST00000549314 266 ntBASIC4.92□□□□□ -1.62
CCDC42Q96M95 AC007066.2-202ENST00000566531 914 ntBASIC4.92□□□□□ -1.62
CCDC42Q96M95 MIR4489-201ENST00000578869 62 ntBASIC4.92□□□□□ -1.62
CCDC42Q96M95 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC42Q96M95 AC011487.3-201ENST00000593607 453 ntBASIC4.92□□□□□ -1.62
CCDC42Q96M95 AC124856.1-201ENST00000600819 896 ntBASIC4.92□□□□□ -1.62
CCDC42Q96M95 AC103792.1-201ENST00000603591 919 ntBASIC4.92□□□□□ -1.62
CCDC42Q96M95 AC023509.5-201ENST00000617434 807 ntBASIC4.92□□□□□ -1.62
CCDC42Q96M95 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CCDC42Q96M95 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC42Q96M95 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC42Q96M95 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC42Q96M95 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CCDC42Q96M95 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC42Q96M95 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC42Q96M95 NAMPTP1-201ENST00000440465 2514 ntBASIC4.91□□□□□ -1.62
CCDC42Q96M95 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC42Q96M95 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC42Q96M95 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC42Q96M95 OR52B1P-201ENST00000316506 909 ntBASIC4.91□□□□□ -1.62
CCDC42Q96M95 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC42Q96M95 RNA5SP305-201ENST00000362665 119 ntBASIC4.91□□□□□ -1.62
CCDC42Q96M95 RNA5SP22-201ENST00000365393 109 ntBASIC4.91□□□□□ -1.62
CCDC42Q96M95 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
CCDC42Q96M95 RN7SKP167-201ENST00000411047 285 ntBASIC4.91□□□□□ -1.62
CCDC42Q96M95 RN7SKP216-201ENST00000411050 312 ntBASIC4.91□□□□□ -1.62
CCDC42Q96M95 AC140479.3-201ENST00000418944 1126 ntBASIC4.91□□□□□ -1.62
CCDC42Q96M95 AC079355.1-201ENST00000421770 223 ntBASIC4.91□□□□□ -1.62
CCDC42Q96M95 AL355433.1-201ENST00000422804 300 ntBASIC4.91□□□□□ -1.62
CCDC42Q96M95 AC007559.1-201ENST00000428736 355 ntBASIC4.91□□□□□ -1.62
CCDC42Q96M95 CYCSP11-201ENST00000436426 315 ntBASIC4.91□□□□□ -1.62
CCDC42Q96M95 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC42Q96M95 OR1H1P-201ENST00000448731 937 ntBASIC4.91□□□□□ -1.62
CCDC42Q96M95 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC42Q96M95 AC005532.2-201ENST00000467154 373 ntBASIC4.91□□□□□ -1.62
CCDC42Q96M95 RPS26P28-201ENST00000470806 348 ntBASIC4.91□□□□□ -1.62
CCDC42Q96M95 RPL36AP41-201ENST00000493820 306 ntBASIC4.91□□□□□ -1.62
CCDC42Q96M95 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC42Q96M95 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC42Q96M95 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC42Q96M95 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms