Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 OSTCP5-201ENST00000425293 453 ntBASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 AL358794.1-201ENST00000445689 381 ntBASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 GAPDHP25-201ENST00000447061 1001 ntBASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 EIF2S2P2-201ENST00000447161 982 ntBASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 RPL7AP10-201ENST00000481016 791 ntBASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 AC022133.1-201ENST00000490961 571 ntBASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 SEPT10P1-201ENST00000517342 1162 ntBASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 AL390334.1-201ENST00000556395 450 ntBASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 RBM22P1-201ENST00000578589 1214 ntBASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 SUGT1P3-202ENST00000604259 383 ntBASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 AC093424.1-201ENST00000604999 338 ntBASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 AC005840.5-201ENST00000619166 599 ntBASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 AC008115.4-201ENST00000619780 775 ntBASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 AC011815.3-201ENST00000624194 473 ntBASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 AP003400.3-201ENST00000624904 346 ntBASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 AC074101.1-201ENST00000637861 241 ntBASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.03□□□□□ -1.44
CDK5RAP3Q96JB5 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 HSPA8P14-201ENST00000552265 1805 ntBASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 RNA5SP335-201ENST00000363817 110 ntBASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 RNA5SP435-201ENST00000364044 108 ntBASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 RNU1-77P-201ENST00000390868 162 ntBASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 AC233289.1-201ENST00000403700 508 ntBASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 MTCO3P4-201ENST00000419236 787 ntBASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 AL354766.1-201ENST00000423396 542 ntBASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 AC092447.3-201ENST00000426027 686 ntBASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 ETF1P3-201ENST00000430422 1160 ntBASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 CYCSP6-201ENST00000434498 302 ntBASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 AC097499.1-201ENST00000444277 208 ntBASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 RPL7P45-201ENST00000455851 743 ntBASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 RN7SL174P-201ENST00000475578 289 ntBASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 RNA5SP362-201ENST00000516048 118 ntBASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 RN7SKP287-201ENST00000516546 266 ntBASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 IGKV3D-34-201ENST00000522638 302 ntBASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 AC011611.5-201ENST00000552477 578 ntBASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 AC023813.4-201ENST00000607580 580 ntBASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 AL049767.1-202ENST00000637826 242 ntBASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 AL078621.3-201ENST00000623707 2042 ntBASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 CASC19-284ENST00000642142 1868 ntBASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 AP005435.3-201ENST00000531260 3198 ntBASIC6.02□□□□□ -1.45
CDK5RAP3Q96JB5 ZNF733P-202ENST00000444809 1573 ntBASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms