Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 RAD1P1-201ENST00000231383 813 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 AC007618.1-201ENST00000366455 732 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.09□□□□□ -1.59
VMP1Q96GC9 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
VMP1Q96GC9 MIR708-201ENST00000390708 88 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.09□□□□□ -1.59
VMP1Q96GC9 RPSAP35-201ENST00000413753 818 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
VMP1Q96GC9 NANOGP4-201ENST00000427230 913 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
VMP1Q96GC9 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.09□□□□□ -1.59
VMP1Q96GC9 YY1P1-201ENST00000427625 668 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 RPL7AP49-201ENST00000429522 581 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.09□□□□□ -1.59
VMP1Q96GC9 RPL12P17-201ENST00000432393 498 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 CFL1P1-202ENST00000432948 411 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 AL591438.1-201ENST00000433508 581 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.09□□□□□ -1.59
VMP1Q96GC9 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.09□□□□□ -1.59
VMP1Q96GC9 AC073465.2-201ENST00000440938 498 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 GTF3AP5-201ENST00000442645 697 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.09□□□□□ -1.59
VMP1Q96GC9 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.09□□□□□ -1.59
VMP1Q96GC9 AL672138.1-201ENST00000450604 1015 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.09□□□□□ -1.59
VMP1Q96GC9 AZGP1P2-201ENST00000454506 345 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 AC245028.2-201ENST00000458673 253 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 AC026348.1-201ENST00000462549 1053 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.09□□□□□ -1.59
VMP1Q96GC9 RPL7P39-201ENST00000481157 744 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 AC023050.1-201ENST00000498198 304 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 AC083829.1-201ENST00000503756 657 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 AC111193.1-201ENST00000504097 155 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 HMGB1P44-201ENST00000508597 572 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 AC092709.1-201ENST00000521355 1045 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 AC026616.1-201ENST00000523157 525 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 HAUS1P3-201ENST00000523909 662 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 AC027369.5-201ENST00000533838 755 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.09□□□□□ -1.59
VMP1Q96GC9 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.09□□□□□ -1.59
VMP1Q96GC9 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.09□□□□□ -1.59
VMP1Q96GC9 AL512310.9-201ENST00000553311 948 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
VMP1Q96GC9 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.09□□□□□ -1.59
VMP1Q96GC9 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.09□□□□□ -1.59
VMP1Q96GC9 AC011477.5-201ENST00000586571 259 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 NF1P5-201ENST00000588287 448 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.09□□□□□ -1.59
VMP1Q96GC9 WBP1LP8-201ENST00000617401 327 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
VMP1Q96GC9 AC000123.2-201ENST00000623124 461 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 AC135068.5-201ENST00000624197 983 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 CASC19-264ENST00000641912 1184 ntBASIC5.09□□□□□ -1.59
VMP1Q96GC9 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.09□□□□□ -1.59
VMP1Q96GC9 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
VMP1Q96GC9 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
VMP1Q96GC9 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VMP1Q96GC9 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VMP1Q96GC9 AC011447.7-201ENST00000624228 1590 ntBASIC5.08□□□□□ -1.6
VMP1Q96GC9 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.08□□□□□ -1.6
VMP1Q96GC9 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VMP1Q96GC9 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VMP1Q96GC9 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
VMP1Q96GC9 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
VMP1Q96GC9 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VMP1Q96GC9 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.08□□□□□ -1.6
VMP1Q96GC9 MTND4P31-201ENST00000425607 1343 ntBASIC5.08□□□□□ -1.6
VMP1Q96GC9 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VMP1Q96GC9 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VMP1Q96GC9 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VMP1Q96GC9 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VMP1Q96GC9 SNORD51.1-201ENST00000365405 77 ntBASIC5.08□□□□□ -1.6
VMP1Q96GC9 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VMP1Q96GC9 UBBP2-201ENST00000376781 231 ntBASIC5.08□□□□□ -1.6
VMP1Q96GC9 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
VMP1Q96GC9 MTND4P24-201ENST00000424002 397 ntBASIC5.08□□□□□ -1.6
VMP1Q96GC9 MTND4LP7-201ENST00000431728 294 ntBASIC5.08□□□□□ -1.6
VMP1Q96GC9 AL035458.1-201ENST00000433096 585 ntBASIC5.08□□□□□ -1.6
VMP1Q96GC9 CYCSP6-201ENST00000434498 302 ntBASIC5.08□□□□□ -1.6
VMP1Q96GC9 YWHAZP2-201ENST00000440317 728 ntBASIC5.08□□□□□ -1.6
VMP1Q96GC9 AC016772.1-201ENST00000444170 1261 ntBASIC5.08□□□□□ -1.6
VMP1Q96GC9 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.08□□□□□ -1.6
VMP1Q96GC9 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.08□□□□□ -1.6
VMP1Q96GC9 AC090804.1-201ENST00000448870 490 ntBASIC5.08□□□□□ -1.6
VMP1Q96GC9 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.08□□□□□ -1.6
VMP1Q96GC9 RNA5SP103-201ENST00000459503 118 ntBASIC5.08□□□□□ -1.6
VMP1Q96GC9 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
VMP1Q96GC9 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.08□□□□□ -1.6
VMP1Q96GC9 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.08□□□□□ -1.6
VMP1Q96GC9 EIF3KP3-201ENST00000514461 639 ntBASIC5.08□□□□□ -1.6
VMP1Q96GC9 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.08□□□□□ -1.6
VMP1Q96GC9 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.08□□□□□ -1.6
VMP1Q96GC9 DEFB109D-201ENST00000529497 240 ntBASIC5.08□□□□□ -1.6
VMP1Q96GC9 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.08□□□□□ -1.6
VMP1Q96GC9 BLZF2P-201ENST00000553776 1130 ntBASIC5.08□□□□□ -1.6
VMP1Q96GC9 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.08□□□□□ -1.6
VMP1Q96GC9 AC106785.3-201ENST00000564064 847 ntBASIC5.08□□□□□ -1.6
VMP1Q96GC9 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.08□□□□□ -1.6
VMP1Q96GC9 MIR4489-201ENST00000578869 62 ntBASIC5.08□□□□□ -1.6
VMP1Q96GC9 AP005403.1-201ENST00000579720 229 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms