Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RNA5SP34-201ENST00000516887 130 ntBASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 AP004607.2-201ENST00000533949 322 ntBASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 BLZF2P-201ENST00000553776 1130 ntBASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 AL158211.1-201ENST00000566763 763 ntBASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 AL022067.1-201ENST00000602426 454 ntBASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 IMMP1LP3-201ENST00000604197 224 ntBASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 AL021707.7-201ENST00000607991 416 ntBASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 AC138965.3-201ENST00000623875 498 ntBASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 SMG1P7-201ENST00000565246 2704 ntBASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 MIR133B-201ENST00000362210 119 ntBASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 RNU6-185P-201ENST00000384421 107 ntBASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 RNA5SP241-201ENST00000391326 114 ntBASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 AP000357.1-201ENST00000409926 1165 ntBASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 AC079809.1-201ENST00000415468 276 ntBASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 RPS4XP16-201ENST00000427198 791 ntBASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 NANOGP4-201ENST00000427230 913 ntBASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 USP12PY-201ENST00000427677 1064 ntBASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 AC022022.1-201ENST00000430304 178 ntBASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 AL035090.1-201ENST00000454835 332 ntBASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 RPS18P6-201ENST00000476880 458 ntBASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 AC037198.2-201ENST00000478845 733 ntBASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 AL049874.2-201ENST00000492636 288 ntBASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 SCARNA20.4-201ENST00000516969 131 ntBASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 CDC42P3-201ENST00000518493 633 ntBASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 MIR4789-201ENST00000577469 82 ntBASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 NXF4-202ENST00000416098 1465 ntBASIC6.41□□□□□ -1.38
CHMP4CQ96CF2 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 RN7SKP153-201ENST00000365026 316 ntBASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 EI24P3-201ENST00000399046 1062 ntBASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 PCNPP4-201ENST00000414817 517 ntBASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 AL121878.1-201ENST00000418638 859 ntBASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 HSPD1P12-201ENST00000429127 1069 ntBASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 MTCO1P52-201ENST00000433928 531 ntBASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 LYPLA1P1-201ENST00000434514 622 ntBASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 GSTM5P1-201ENST00000434751 660 ntBASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 AC024558.1-201ENST00000505008 528 ntBASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 AC096571.1-202ENST00000506634 735 ntBASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 AC109464.1-201ENST00000511091 819 ntBASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 MTND6P2-201ENST00000512226 524 ntBASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 MTND2P32-201ENST00000521584 1038 ntBASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 AC068993.1-201ENST00000546724 589 ntBASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 MTCO2P2-201ENST00000591258 225 ntBASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 SUMO2P15-201ENST00000604285 278 ntBASIC6.4□□□□□ -1.38
CHMP4CQ96CF2 Z82195.1-201ENST00000604558 398 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms