Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.29□□□□□ -1.4
ERCC4Q92889 AC131159.1-201ENST00000621854 213 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 AL078621.3-201ENST00000623707 2042 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ERCC4Q92889 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.29□□□□□ -1.4
ERCC4Q92889 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.29□□□□□ -1.4
ERCC4Q92889 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ERCC4Q92889 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.29□□□□□ -1.4
ERCC4Q92889 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.29□□□□□ -1.4
ERCC4Q92889 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.28□□□□□ -1.4
ERCC4Q92889 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.28□□□□□ -1.4
ERCC4Q92889 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.28□□□□□ -1.4
ERCC4Q92889 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ERCC4Q92889 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ERCC4Q92889 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.28□□□□□ -1.4
ERCC4Q92889 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.28□□□□□ -1.4
ERCC4Q92889 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC6.28□□□□□ -1.4
ERCC4Q92889 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
ERCC4Q92889 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ERCC4Q92889 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
ERCC4Q92889 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
ERCC4Q92889 AL672167.2-201ENST00000377164 879 ntBASIC6.28□□□□□ -1.4
ERCC4Q92889 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ERCC4Q92889 RNU5A-2P-201ENST00000384337 116 ntBASIC6.28□□□□□ -1.4
ERCC4Q92889 LYPLA1P3-201ENST00000402650 695 ntBASIC6.28□□□□□ -1.4
ERCC4Q92889 AC010385.1-201ENST00000412374 256 ntBASIC6.28□□□□□ -1.4
ERCC4Q92889 HMGB3P24-201ENST00000433260 622 ntBASIC6.28□□□□□ -1.4
ERCC4Q92889 TRAPPC13P1-201ENST00000435991 1062 ntBASIC6.28□□□□□ -1.4
ERCC4Q92889 UBE2D3P1-201ENST00000436669 444 ntBASIC6.28□□□□□ -1.4
ERCC4Q92889 THAP5P1-201ENST00000439089 262 ntBASIC6.28□□□□□ -1.4
ERCC4Q92889 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC6.28□□□□□ -1.4
ERCC4Q92889 HMGN1P2-201ENST00000445197 310 ntBASIC6.28□□□□□ -1.4
ERCC4Q92889 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.28□□□□□ -1.4
ERCC4Q92889 MYO5BP2-201ENST00000449815 1277 ntBASIC6.28□□□□□ -1.4
ERCC4Q92889 AZGP1P2-201ENST00000454506 345 ntBASIC6.28□□□□□ -1.4
ERCC4Q92889 USP9YP25-201ENST00000457708 443 ntBASIC6.28□□□□□ -1.4
ERCC4Q92889 RPS23P6-201ENST00000466136 431 ntBASIC6.28□□□□□ -1.4
ERCC4Q92889 AC098583.1-201ENST00000480875 255 ntBASIC6.28□□□□□ -1.4
ERCC4Q92889 RN7SL570P-201ENST00000484405 292 ntBASIC6.28□□□□□ -1.4
ERCC4Q92889 AC107398.1-201ENST00000486904 505 ntBASIC6.28□□□□□ -1.4
ERCC4Q92889 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ERCC4Q92889 HPRT1P2-201ENST00000505250 544 ntBASIC6.28□□□□□ -1.4
ERCC4Q92889 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.28□□□□□ -1.4
ERCC4Q92889 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.28□□□□□ -1.4
ERCC4Q92889 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.28□□□□□ -1.4
ERCC4Q92889 RN7SKP34-201ENST00000516142 244 ntBASIC6.28□□□□□ -1.4
ERCC4Q92889 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.28□□□□□ -1.4
ERCC4Q92889 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.28□□□□□ -1.4
ERCC4Q92889 AL390334.1-201ENST00000556395 450 ntBASIC6.28□□□□□ -1.4
ERCC4Q92889 DPPA2P4-201ENST00000563717 878 ntBASIC6.28□□□□□ -1.4
ERCC4Q92889 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.28□□□□□ -1.4
ERCC4Q92889 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.28□□□□□ -1.4
ERCC4Q92889 AC016877.3-201ENST00000606778 504 ntBASIC6.28□□□□□ -1.4
ERCC4Q92889 AC011374.2-201ENST00000607135 526 ntBASIC6.28□□□□□ -1.4
ERCC4Q92889 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.28□□□□□ -1.4
ERCC4Q92889 AC096586.1-201ENST00000610267 561 ntBASIC6.28□□□□□ -1.4
ERCC4Q92889 AL450489.1-201ENST00000612071 468 ntBASIC6.28□□□□□ -1.4
ERCC4Q92889 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.28□□□□□ -1.4
ERCC4Q92889 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.28□□□□□ -1.4
ERCC4Q92889 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.28□□□□□ -1.4
ERCC4Q92889 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
ERCC4Q92889 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
ERCC4Q92889 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
ERCC4Q92889 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
ERCC4Q92889 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.27□□□□□ -1.4
ERCC4Q92889 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ERCC4Q92889 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ERCC4Q92889 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
ERCC4Q92889 SAMMSON-213ENST00000641336 1521 ntBASIC6.27□□□□□ -1.41
ERCC4Q92889 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.27□□□□□ -1.41
ERCC4Q92889 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ERCC4Q92889 Y_RNA.578-201ENST00000390903 88 ntBASIC6.27□□□□□ -1.41
ERCC4Q92889 MIR1203-201ENST00000408812 85 ntBASIC6.27□□□□□ -1.41
ERCC4Q92889 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC6.27□□□□□ -1.41
ERCC4Q92889 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.27□□□□□ -1.41
ERCC4Q92889 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC6.27□□□□□ -1.41
ERCC4Q92889 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.27□□□□□ -1.41
ERCC4Q92889 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC6.27□□□□□ -1.41
ERCC4Q92889 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.27□□□□□ -1.41
ERCC4Q92889 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC6.27□□□□□ -1.41
ERCC4Q92889 PTENP1-201ENST00000447117 1215 ntBASIC6.27□□□□□ -1.41
ERCC4Q92889 AL050341.1-201ENST00000447743 313 ntBASIC6.27□□□□□ -1.41
ERCC4Q92889 CBX1P2-201ENST00000453841 458 ntBASIC6.27□□□□□ -1.41
ERCC4Q92889 RPL23AP44-201ENST00000482216 473 ntBASIC6.27□□□□□ -1.41
ERCC4Q92889 OR11I1P-201ENST00000486033 954 ntBASIC6.27□□□□□ -1.41
ERCC4Q92889 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.27□□□□□ -1.41
ERCC4Q92889 AC074255.1-201ENST00000511259 501 ntBASIC6.27□□□□□ -1.41
ERCC4Q92889 AC108120.2-201ENST00000512973 294 ntBASIC6.27□□□□□ -1.41
ERCC4Q92889 AC119751.1-201ENST00000513357 765 ntBASIC6.27□□□□□ -1.41
ERCC4Q92889 RNU5A-4P-201ENST00000516588 111 ntBASIC6.27□□□□□ -1.41
ERCC4Q92889 MTCYBP19-201ENST00000517463 1124 ntBASIC6.27□□□□□ -1.41
ERCC4Q92889 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC6.27□□□□□ -1.41
ERCC4Q92889 MTND2P26-201ENST00000528255 1029 ntBASIC6.27□□□□□ -1.41
ERCC4Q92889 DEFB130C-202ENST00000530001 230 ntBASIC6.27□□□□□ -1.41
ERCC4Q92889 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC6.27□□□□□ -1.41
ERCC4Q92889 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.27□□□□□ -1.41
ERCC4Q92889 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.27□□□□□ -1.41
ERCC4Q92889 AC068993.1-201ENST00000546724 589 ntBASIC6.27□□□□□ -1.41
ERCC4Q92889 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.27□□□□□ -1.41
ERCC4Q92889 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms