Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 MAPK10-338ENST00000641647 3362 ntBASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 OR9K1P-202ENST00000641111 3217 ntBASIC5.5□□□□□ -1.53
ATG4AQ8WYN0 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 AC011755.1-201ENST00000623763 2049 ntBASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 MIR589-201ENST00000385238 99 ntBASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 AL136310.1-201ENST00000404926 654 ntBASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 RN7SKP16-201ENST00000410180 299 ntBASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 OR2AT2P-201ENST00000413438 905 ntBASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 BMS1P17-202ENST00000416720 316 ntBASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 OR5M12P-201ENST00000423388 929 ntBASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 PRUNEP1-201ENST00000425846 705 ntBASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 RPS4XP16-201ENST00000427198 791 ntBASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 RPL36AP39-201ENST00000445859 318 ntBASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 OR51B8P-201ENST00000449892 769 ntBASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 AC104634.1-201ENST00000452720 462 ntBASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 NDUFA5P5-201ENST00000468361 342 ntBASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 OR11I1P-201ENST00000486033 954 ntBASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 RPS24P16-201ENST00000497294 392 ntBASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 HMGB1P44-201ENST00000508597 572 ntBASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 SNORD46.2-201ENST00000516021 102 ntBASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 RNU6-1308P-201ENST00000516817 103 ntBASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 OR5D2P-201ENST00000524390 911 ntBASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 MTCO2P15-201ENST00000532655 656 ntBASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 ZNF321P-202ENST00000550843 495 ntBASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 AL139344.1-201ENST00000605228 195 ntBASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 AC080013.6-201ENST00000606185 215 ntBASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 AC011374.2-201ENST00000607135 526 ntBASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 RNU6-84P-201ENST00000607737 102 ntBASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 OR2BH1P-201ENST00000608850 864 ntBASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4AQ8WYN0 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 AC245100.2-201ENST00000454544 1679 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 MIR133B-201ENST00000362210 119 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 RNA5SP234-201ENST00000363916 119 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 RNU4-51P-201ENST00000364206 140 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 SNORD116-8-201ENST00000384365 95 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 MCTS2P-201ENST00000394552 546 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 RN7SKP278-201ENST00000410504 342 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 LINC01347-201ENST00000417964 355 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 IPPKP1-201ENST00000422501 768 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 TNPO1P1-201ENST00000423641 1138 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 HMGN2P27-201ENST00000427352 270 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 277.8 ms