Protein–RNA interactions for Protein: Q8NEK5

ZNF548, Zinc finger protein 548, humanhuman

Predicted RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548Q8NEK5 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 AC092111.2-201ENST00000611627 1414 ntBASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 AC103591.2-201ENST00000265259 766 ntBASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 HSPA8P15-201ENST00000401676 786 ntBASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 AL109941.1-201ENST00000401925 229 ntBASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 AC211486.3-201ENST00000412694 621 ntBASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 AC093162.1-201ENST00000419682 124 ntBASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 NANOGP5-201ENST00000424456 877 ntBASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 TXNL1P1-201ENST00000429528 554 ntBASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 PTP4A1P3-201ENST00000433661 420 ntBASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 AL590399.4-201ENST00000436561 601 ntBASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 AL772161.1-201ENST00000439130 476 ntBASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 AC104634.1-201ENST00000452720 462 ntBASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 AC009127.1-201ENST00000467090 155 ntBASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 AC093770.1-201ENST00000511559 571 ntBASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 EIF3KP3-201ENST00000514461 639 ntBASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 HMGB1P46-201ENST00000520062 610 ntBASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 NOP56P3-201ENST00000549457 385 ntBASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 AC145350.1-201ENST00000567426 208 ntBASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 OR1F2P-201ENST00000570470 933 ntBASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 AC124283.4-201ENST00000581815 456 ntBASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 RN7SL356P-201ENST00000582228 248 ntBASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 AC025165.5-201ENST00000602802 578 ntBASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 AP002802.2-201ENST00000605877 235 ntBASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 OR7A19P-201ENST00000608051 733 ntBASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 AC023421.1-201ENST00000590535 1785 ntBASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF548Q8NEK5 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 DDX18P6-201ENST00000450119 1997 ntBASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 CASC19-281ENST00000642118 1554 ntBASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 MIR365B-201ENST00000362317 111 ntBASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 RNU4-4P-201ENST00000364588 130 ntBASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 RNU6-468P-201ENST00000384003 109 ntBASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 DBIP1-201ENST00000401435 260 ntBASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 HMGN2P27-201ENST00000427352 270 ntBASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 RPL7AP49-201ENST00000429522 581 ntBASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 AL591438.1-201ENST00000433508 581 ntBASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 MTCO1P53-201ENST00000441633 699 ntBASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 SETD6P1-201ENST00000444575 317 ntBASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 AC090804.1-201ENST00000448870 490 ntBASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 HMGB1P26-201ENST00000452520 628 ntBASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 RPL7P40-201ENST00000481703 745 ntBASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 AC110775.1-201ENST00000513721 462 ntBASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 SNORA70.11-201ENST00000515987 138 ntBASIC5.22□□□□□ -1.57
ZNF548Q8NEK5 SNORA70.13-201ENST00000516116 138 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms