Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC027455.1-201ENST00000574104 594 ntBASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 AC020978.7-201ENST00000575953 1187 ntBASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 AC055839.1-201ENST00000634467 498 ntBASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 THAP12P4-201ENST00000528321 2266 ntBASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 AC104118.1-201ENST00000607625 1589 ntBASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 IRF5P1-201ENST00000504852 2164 ntBASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.68□□□□□ -1.66
NUDCD3Q8IVD9 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 RNA5SP428-201ENST00000365129 132 ntBASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 PDSS1P1-201ENST00000422953 1114 ntBASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 AC245047.2-201ENST00000441060 530 ntBASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 SEPT7P6-201ENST00000469999 1143 ntBASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 RN7SL174P-201ENST00000475578 289 ntBASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 AC024558.1-201ENST00000505008 528 ntBASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 RNA5SP362-201ENST00000516048 118 ntBASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 NPM1P52-201ENST00000518264 846 ntBASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 AC084033.1-201ENST00000550830 633 ntBASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 RN7SL176P-201ENST00000580352 264 ntBASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 AC011447.4-201ENST00000587562 111 ntBASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 AL135786.2-201ENST00000608422 615 ntBASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 AL049767.1-202ENST00000637826 242 ntBASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUDCD3Q8IVD9 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 CASC19-204ENST00000641001 2055 ntBASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 BRAFP1-201ENST00000445336 2703 ntBASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 RNU1-94P-201ENST00000362627 173 ntBASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 AC104297.1-201ENST00000393779 870 ntBASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 GTF2IP5-201ENST00000414608 731 ntBASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 AL355994.1-201ENST00000424379 260 ntBASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 RHOT1P3-201ENST00000436571 331 ntBASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 AL133244.1-201ENST00000456007 258 ntBASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 AC134698.5-201ENST00000519444 336 ntBASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 SNORD39.2-201ENST00000579995 76 ntBASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 HMGB2P1-201ENST00000591146 634 ntBASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 AC008966.2-201ENST00000606157 453 ntBASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 AC007497.1-201ENST00000610421 561 ntBASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 AC107027.3-201ENST00000565095 3473 ntBASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.66□□□□□ -1.66
NUDCD3Q8IVD9 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NUDCD3Q8IVD9 AC099654.2-201ENST00000433031 1980 ntBASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms