Protein–RNA interactions for Protein: Q8IV31

TMEM139, Transmembrane protein 139, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139Q8IV31 KARSP1-201ENST00000451871 1752 ntBASIC5.06□□□□□ -1.6
TMEM139Q8IV31 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
TMEM139Q8IV31 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.06□□□□□ -1.6
TMEM139Q8IV31 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TMEM139Q8IV31 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TMEM139Q8IV31 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.06□□□□□ -1.6
TMEM139Q8IV31 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TMEM139Q8IV31 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
TMEM139Q8IV31 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.06□□□□□ -1.6
TMEM139Q8IV31 RNU1-108P-201ENST00000362556 161 ntBASIC5.06□□□□□ -1.6
TMEM139Q8IV31 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.06□□□□□ -1.6
TMEM139Q8IV31 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TMEM139Q8IV31 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.06□□□□□ -1.6
TMEM139Q8IV31 EIF4EP1-201ENST00000422311 642 ntBASIC5.06□□□□□ -1.6
TMEM139Q8IV31 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.06□□□□□ -1.6
TMEM139Q8IV31 AP000949.1-201ENST00000438328 629 ntBASIC5.06□□□□□ -1.6
TMEM139Q8IV31 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.06□□□□□ -1.6
TMEM139Q8IV31 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.06□□□□□ -1.6
TMEM139Q8IV31 MTND2P25-201ENST00000449028 610 ntBASIC5.06□□□□□ -1.6
TMEM139Q8IV31 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.06□□□□□ -1.6
TMEM139Q8IV31 RPL7AP28-201ENST00000464513 571 ntBASIC5.06□□□□□ -1.6
TMEM139Q8IV31 RPL23AP65-201ENST00000475608 468 ntBASIC5.06□□□□□ -1.6
TMEM139Q8IV31 RN7SL41P-201ENST00000476144 297 ntBASIC5.06□□□□□ -1.6
TMEM139Q8IV31 RN7SL222P-201ENST00000476452 299 ntBASIC5.06□□□□□ -1.6
TMEM139Q8IV31 RN7SL319P-201ENST00000480656 221 ntBASIC5.06□□□□□ -1.6
TMEM139Q8IV31 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.06□□□□□ -1.6
TMEM139Q8IV31 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.06□□□□□ -1.6
TMEM139Q8IV31 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.06□□□□□ -1.6
TMEM139Q8IV31 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.06□□□□□ -1.6
TMEM139Q8IV31 MIR4433B-201ENST00000581329 102 ntBASIC5.06□□□□□ -1.6
TMEM139Q8IV31 AC022726.1-201ENST00000587475 207 ntBASIC5.06□□□□□ -1.6
TMEM139Q8IV31 AC067838.1-201ENST00000606064 577 ntBASIC5.06□□□□□ -1.6
TMEM139Q8IV31 AL355802.4-201ENST00000607635 548 ntBASIC5.06□□□□□ -1.6
TMEM139Q8IV31 AP002360.3-201ENST00000607673 710 ntBASIC5.06□□□□□ -1.6
TMEM139Q8IV31 AL133370.2-201ENST00000619934 439 ntBASIC5.06□□□□□ -1.6
TMEM139Q8IV31 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
TMEM139Q8IV31 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.06□□□□□ -1.6
TMEM139Q8IV31 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TMEM139Q8IV31 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.06□□□□□ -1.6
TMEM139Q8IV31 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TMEM139Q8IV31 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
TMEM139Q8IV31 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.06□□□□□ -1.6
TMEM139Q8IV31 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 AC091046.3-201ENST00000631455 1574 ntBASIC5.05□□□□□ -1.6
TMEM139Q8IV31 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 RNA5SP28-201ENST00000363841 119 ntBASIC5.05□□□□□ -1.6
TMEM139Q8IV31 RNU6-1251P-201ENST00000364502 107 ntBASIC5.05□□□□□ -1.6
TMEM139Q8IV31 SNORD51.1-201ENST00000365405 77 ntBASIC5.05□□□□□ -1.6
TMEM139Q8IV31 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 U3.36-201ENST00000408418 213 ntBASIC5.05□□□□□ -1.6
TMEM139Q8IV31 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 SKP1P3-201ENST00000429280 487 ntBASIC5.05□□□□□ -1.6
TMEM139Q8IV31 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 AP002345.1-201ENST00000456493 928 ntBASIC5.05□□□□□ -1.6
TMEM139Q8IV31 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 AC008897.1-201ENST00000494006 347 ntBASIC5.05□□□□□ -1.6
TMEM139Q8IV31 MTND3P24-201ENST00000506306 329 ntBASIC5.05□□□□□ -1.6
TMEM139Q8IV31 AC008628.1-201ENST00000508663 265 ntBASIC5.05□□□□□ -1.6
TMEM139Q8IV31 AC091868.1-201ENST00000508746 304 ntBASIC5.05□□□□□ -1.6
TMEM139Q8IV31 AC067904.2-201ENST00000517322 1283 ntBASIC5.05□□□□□ -1.6
TMEM139Q8IV31 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 MTND6P33-201ENST00000571794 183 ntBASIC5.05□□□□□ -1.6
TMEM139Q8IV31 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 AC010201.1-201ENST00000605051 540 ntBASIC5.05□□□□□ -1.6
TMEM139Q8IV31 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 AC245100.2-201ENST00000454544 1679 ntBASIC5.05□□□□□ -1.6
TMEM139Q8IV31 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.05□□□□□ -1.6
TMEM139Q8IV31 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TMEM139Q8IV31 AL512283.1-201ENST00000606756 1384 ntBASIC5.04□□□□□ -1.6
TMEM139Q8IV31 ZFRP1-201ENST00000457579 2970 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms