Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 RPL7P61-201ENST00000451721 751 ntBASIC4.23□□□□□ -1.73
LRRC28Q86X40 SBDSP1-204ENST00000453858 737 ntBASIC4.23□□□□□ -1.73
LRRC28Q86X40 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LRRC28Q86X40 AC010350.1-201ENST00000504908 231 ntBASIC4.23□□□□□ -1.73
LRRC28Q86X40 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 RNA5SP392-201ENST00000516905 112 ntBASIC4.23□□□□□ -1.73
LRRC28Q86X40 AP001922.4-201ENST00000526967 290 ntBASIC4.23□□□□□ -1.73
LRRC28Q86X40 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 PCNPP1-201ENST00000552501 511 ntBASIC4.23□□□□□ -1.73
LRRC28Q86X40 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 AC130352.1-201ENST00000602979 661 ntBASIC4.23□□□□□ -1.73
LRRC28Q86X40 AC005084.1-201ENST00000605160 304 ntBASIC4.23□□□□□ -1.73
LRRC28Q86X40 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LRRC28Q86X40 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
LRRC28Q86X40 DDX18P3-201ENST00000404856 2007 ntBASIC4.22□□□□□ -1.73
LRRC28Q86X40 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LRRC28Q86X40 HSPD1P14-201ENST00000432666 1618 ntBASIC4.22□□□□□ -1.73
LRRC28Q86X40 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.22□□□□□ -1.73
LRRC28Q86X40 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LRRC28Q86X40 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LRRC28Q86X40 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LRRC28Q86X40 AP002530.1-201ENST00000405705 684 ntBASIC4.22□□□□□ -1.73
LRRC28Q86X40 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LRRC28Q86X40 AL356968.2-201ENST00000412769 1257 ntBASIC4.22□□□□□ -1.73
LRRC28Q86X40 Z74021.1-201ENST00000423610 407 ntBASIC4.22□□□□□ -1.73
LRRC28Q86X40 AL590762.4-201ENST00000425885 253 ntBASIC4.22□□□□□ -1.73
LRRC28Q86X40 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LRRC28Q86X40 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.22□□□□□ -1.73
LRRC28Q86X40 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.22□□□□□ -1.73
LRRC28Q86X40 PRPF38AP2-201ENST00000438179 851 ntBASIC4.22□□□□□ -1.73
LRRC28Q86X40 SUMO2P1-206ENST00000445436 284 ntBASIC4.22□□□□□ -1.73
LRRC28Q86X40 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.22□□□□□ -1.73
LRRC28Q86X40 snoU13.20-201ENST00000459180 104 ntBASIC4.22□□□□□ -1.73
LRRC28Q86X40 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.22□□□□□ -1.73
LRRC28Q86X40 ATP5G1P3-201ENST00000463301 410 ntBASIC4.22□□□□□ -1.73
LRRC28Q86X40 RN7SL319P-201ENST00000480656 221 ntBASIC4.22□□□□□ -1.73
LRRC28Q86X40 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LRRC28Q86X40 AC140172.1-201ENST00000502928 141 ntBASIC4.22□□□□□ -1.73
LRRC28Q86X40 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.22□□□□□ -1.73
LRRC28Q86X40 AC110775.1-201ENST00000513721 462 ntBASIC4.22□□□□□ -1.73
LRRC28Q86X40 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.22□□□□□ -1.73
LRRC28Q86X40 RNA5SP43-201ENST00000516559 110 ntBASIC4.22□□□□□ -1.73
LRRC28Q86X40 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.22□□□□□ -1.73
LRRC28Q86X40 OR5D15P-201ENST00000531671 942 ntBASIC4.22□□□□□ -1.73
LRRC28Q86X40 AC005000.1-201ENST00000536192 288 ntBASIC4.22□□□□□ -1.73
LRRC28Q86X40 AC008033.2-201ENST00000542626 177 ntBASIC4.22□□□□□ -1.73
LRRC28Q86X40 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.22□□□□□ -1.73
LRRC28Q86X40 EDDM3DP-201ENST00000554692 434 ntBASIC4.22□□□□□ -1.73
LRRC28Q86X40 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.22□□□□□ -1.73
LRRC28Q86X40 OR1F2P-201ENST00000570470 933 ntBASIC4.22□□□□□ -1.73
LRRC28Q86X40 MIR4675-201ENST00000577898 77 ntBASIC4.22□□□□□ -1.73
LRRC28Q86X40 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.22□□□□□ -1.73
LRRC28Q86X40 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.22□□□□□ -1.73
LRRC28Q86X40 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.22□□□□□ -1.73
LRRC28Q86X40 AC005520.3-201ENST00000602874 370 ntBASIC4.22□□□□□ -1.73
LRRC28Q86X40 AL158196.1-201ENST00000616786 434 ntBASIC4.22□□□□□ -1.73
LRRC28Q86X40 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.22□□□□□ -1.73
LRRC28Q86X40 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.22□□□□□ -1.73
LRRC28Q86X40 AC138627.1-204ENST00000641894 765 ntBASIC4.22□□□□□ -1.73
LRRC28Q86X40 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LRRC28Q86X40 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LRRC28Q86X40 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
LRRC28Q86X40 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
LRRC28Q86X40 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
LRRC28Q86X40 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.21□□□□□ -1.73
LRRC28Q86X40 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
LRRC28Q86X40 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.21□□□□□ -1.74
LRRC28Q86X40 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LRRC28Q86X40 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LRRC28Q86X40 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LRRC28Q86X40 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
LRRC28Q86X40 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LRRC28Q86X40 SNORA51.8-201ENST00000384234 132 ntBASIC4.21□□□□□ -1.74
LRRC28Q86X40 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
LRRC28Q86X40 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LRRC28Q86X40 AL021331.1-201ENST00000402817 582 ntBASIC4.21□□□□□ -1.74
LRRC28Q86X40 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.21□□□□□ -1.74
LRRC28Q86X40 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.21□□□□□ -1.74
LRRC28Q86X40 RPS26P13-201ENST00000419030 330 ntBASIC4.21□□□□□ -1.74
LRRC28Q86X40 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.21□□□□□ -1.74
LRRC28Q86X40 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.21□□□□□ -1.74
LRRC28Q86X40 RHOT1P3-201ENST00000436571 331 ntBASIC4.21□□□□□ -1.74
LRRC28Q86X40 AC073648.4-201ENST00000442655 781 ntBASIC4.21□□□□□ -1.74
LRRC28Q86X40 AL137845.2-201ENST00000444292 988 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms