Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.98□□□□□ -1.45
ATG4DQ86TL0 MTHFD1P1-201ENST00000413059 2764 ntBASIC5.98□□□□□ -1.45
ATG4DQ86TL0 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.98□□□□□ -1.45
ATG4DQ86TL0 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
ATG4DQ86TL0 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
ATG4DQ86TL0 AC008957.3-201ENST00000624112 2242 ntBASIC5.98□□□□□ -1.45
ATG4DQ86TL0 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ATG4DQ86TL0 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ATG4DQ86TL0 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ATG4DQ86TL0 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ATG4DQ86TL0 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 FAM32BP-201ENST00000344033 333 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 RN7SKP184-201ENST00000362348 333 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 RNU5F-6P-201ENST00000362979 116 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 Y_RNA.86-201ENST00000363020 111 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 RNU6-621P-201ENST00000364752 109 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 RNU6-483P-201ENST00000384088 108 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 SNORD65-201ENST00000391079 73 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AC104297.1-201ENST00000393779 870 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 OR7E101P-201ENST00000400428 513 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 GSTA9P-201ENST00000406231 611 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 RN7SKP58-201ENST00000411010 305 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 RPL26P29-201ENST00000415623 438 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 GAPDHP33-201ENST00000443168 1013 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 YWHAQP9-201ENST00000445891 512 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 UBBP5-201ENST00000446970 266 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AC005002.1-201ENST00000447458 540 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 KF459542.1-201ENST00000450908 553 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AL033528.1-201ENST00000453780 140 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AL035407.2-201ENST00000454090 378 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AC093166.4-201ENST00000457867 318 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AC016687.1-201ENST00000482574 353 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 KLRA1P-201ENST00000503499 986 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AC022447.3-201ENST00000506865 495 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 NDUFB4P2-201ENST00000509515 391 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 SCARNA5-201ENST00000516201 276 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 RN7SKP196-201ENST00000516267 345 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AC008429.2-201ENST00000523057 864 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AC027667.1-201ENST00000545814 304 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AC107954.1-201ENST00000565906 727 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AL683813.2-201ENST00000605245 502 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AP005137.2-201ENST00000609238 400 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 MLECP1-201ENST00000615893 709 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AL158196.1-201ENST00000616786 434 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AC136475.10-201ENST00000620253 385 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 MIR6823-201ENST00000622118 61 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AC073488.9-201ENST00000631601 754 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 MIR1321-201ENST00000637766 79 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 AL121936.2-201ENST00000641935 662 ntBASIC5.97□□□□□ -1.45
ATG4DQ86TL0 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ATG4DQ86TL0 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms