Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 OFD1P9Y-201ENST00000417699 1491 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 HSP90AA2P-201ENST00000530115 2196 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 AL451064.2-201ENST00000623514 1654 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 AC010329.1-201ENST00000593903 8328 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 AC008957.3-201ENST00000624112 2242 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 AC005294.1-201ENST00000355509 281 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 Y_RNA.184-201ENST00000363884 108 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 RNU6-619P-201ENST00000365146 108 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 Y_RNA.387-201ENST00000383918 102 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 RNU6-74P-201ENST00000384235 107 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 RNU6-452P-201ENST00000384406 107 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 RNU6-244P-201ENST00000391028 104 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 AC245054.2-201ENST00000415639 319 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 AC113618.1-201ENST00000416747 285 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 RPL7P56-201ENST00000429441 717 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 AC015983.1-201ENST00000441577 373 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 RPSAP40-201ENST00000442343 891 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 NDUFA5P7-201ENST00000452914 242 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 ST13P21-201ENST00000453250 1098 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 RPL34P34-201ENST00000465389 354 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 RPS4XP23-201ENST00000487801 237 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 RNU6-445P-201ENST00000516949 107 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 RNU6-835P-201ENST00000516974 104 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 AC091932.1-201ENST00000569381 427 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 ACTG1P15-201ENST00000570019 1063 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 OR7E19P-202ENST00000589942 844 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 AP006248.2-201ENST00000623309 592 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 AC008626.2-201ENST00000624425 248 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 AC011471.4-201ENST00000638271 216 ntBASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC7.03□□□□□ -1.28
LYSMD3Q7Z3D4 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LYSMD3Q7Z3D4 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
LYSMD3Q7Z3D4 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LYSMD3Q7Z3D4 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
LYSMD3Q7Z3D4 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LYSMD3Q7Z3D4 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
LYSMD3Q7Z3D4 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LYSMD3Q7Z3D4 CDY19P-201ENST00000411668 1613 ntBASIC7.02□□□□□ -1.29
LYSMD3Q7Z3D4 CDY18P-201ENST00000438294 1609 ntBASIC7.02□□□□□ -1.29
LYSMD3Q7Z3D4 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC7.02□□□□□ -1.29
LYSMD3Q7Z3D4 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LYSMD3Q7Z3D4 AL359091.1-201ENST00000449048 1734 ntBASIC7.02□□□□□ -1.29
LYSMD3Q7Z3D4 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
LYSMD3Q7Z3D4 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.02□□□□□ -1.29
LYSMD3Q7Z3D4 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms