Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 RNU1-74P-201ENST00000384108 171 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 RNU6-185P-201ENST00000384421 107 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 RNU6-83P-201ENST00000384568 112 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AC016739.1-201ENST00000405359 345 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 RNF10P1-201ENST00000418589 369 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AC090960.1-201ENST00000421072 306 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 NDUFB4P8-201ENST00000435351 367 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 GAPDHP48-201ENST00000436626 961 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 PCBP2P1-201ENST00000437262 977 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 FGF7P5-201ENST00000441829 291 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 RSL24D1P3-201ENST00000449255 495 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AL133217.1-201ENST00000450980 425 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AC233982.1-201ENST00000451247 436 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 NPM1P13-201ENST00000452663 865 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AC093166.4-201ENST00000457867 318 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 RNU5A-4P-201ENST00000516588 111 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 snoU109.6-201ENST00000516831 118 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 MTND2P26-201ENST00000528255 1029 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AC122688.1-201ENST00000541494 223 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AL354943.1-201ENST00000572103 781 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 MIR7853-201ENST00000584820 132 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AC010245.2-201ENST00000606908 1167 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AL136131.3-201ENST00000607600 188 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AP003392.5-201ENST00000607857 415 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AC108673.3-201ENST00000609183 335 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AL360219.1-201ENST00000610230 366 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AP000255.1-201ENST00000610276 676 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AC009318.3-201ENST00000616916 503 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AL356274.1-201ENST00000617064 410 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AC007342.8-201ENST00000623278 678 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AP000676.3-201ENST00000623299 569 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 MIR1322-201ENST00000638013 71 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 ZNF663P-202ENST00000641770 1131 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AL603750.1-201ENST00000624216 1717 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AC079097.1-201ENST00000512187 1399 ntBASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 AC005261.4-201ENST00000600047 1385 ntBASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 HSPA8P14-201ENST00000552265 1805 ntBASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 SNORA68.2-201ENST00000391263 128 ntBASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 ERHP2-201ENST00000402323 299 ntBASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 AL356131.1-201ENST00000405826 414 ntBASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 TCEA1P4-201ENST00000415066 844 ntBASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 MFSD13B-201ENST00000420133 1290 ntBASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 AC022022.1-201ENST00000430304 178 ntBASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 NECAP1P2-201ENST00000455668 727 ntBASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 NXT1P1-201ENST00000458481 316 ntBASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 AC021006.1-201ENST00000489849 553 ntBASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.16□□□□□ -1.58
PTCHD4Q6ZW05 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms