Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.52□□□□□ -1.69
RIF1Q5UIP0 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.52□□□□□ -1.69
RIF1Q5UIP0 AC011815.3-201ENST00000624194 473 ntBASIC4.52□□□□□ -1.69
RIF1Q5UIP0 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RIF1Q5UIP0 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.52□□□□□ -1.69
RIF1Q5UIP0 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
RIF1Q5UIP0 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RIF1Q5UIP0 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RIF1Q5UIP0 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC4.52□□□□□ -1.69
RIF1Q5UIP0 AC106871.1-201ENST00000568324 3102 ntBASIC4.52□□□□□ -1.69
RIF1Q5UIP0 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RIF1Q5UIP0 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RIF1Q5UIP0 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RIF1Q5UIP0 FAM91A3P-201ENST00000456826 2544 ntBASIC4.52□□□□□ -1.69
RIF1Q5UIP0 RNU6-1279P-201ENST00000383917 103 ntBASIC4.52□□□□□ -1.69
RIF1Q5UIP0 Z98745.1-201ENST00000402553 494 ntBASIC4.52□□□□□ -1.69
RIF1Q5UIP0 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.52□□□□□ -1.69
RIF1Q5UIP0 EIF2S2P5-201ENST00000457635 968 ntBASIC4.52□□□□□ -1.69
RIF1Q5UIP0 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.52□□□□□ -1.69
RIF1Q5UIP0 AP005205.1-201ENST00000563503 508 ntBASIC4.52□□□□□ -1.69
RIF1Q5UIP0 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.52□□□□□ -1.69
RIF1Q5UIP0 AC106782.4-201ENST00000568264 210 ntBASIC4.52□□□□□ -1.69
RIF1Q5UIP0 AC087499.8-201ENST00000578406 226 ntBASIC4.52□□□□□ -1.69
RIF1Q5UIP0 KC877982.1-201ENST00000602313 470 ntBASIC4.52□□□□□ -1.69
RIF1Q5UIP0 SNORA51-201ENST00000606420 132 ntBASIC4.52□□□□□ -1.69
RIF1Q5UIP0 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.52□□□□□ -1.69
RIF1Q5UIP0 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RIF1Q5UIP0 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RIF1Q5UIP0 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC4.52□□□□□ -1.69
RIF1Q5UIP0 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
RIF1Q5UIP0 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.51□□□□□ -1.69
RIF1Q5UIP0 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RIF1Q5UIP0 RNU6ATAC-201ENST00000408749 126 ntBASIC4.51□□□□□ -1.69
RIF1Q5UIP0 LINC00993-201ENST00000420453 540 ntBASIC4.51□□□□□ -1.69
RIF1Q5UIP0 PSAT1P4-201ENST00000466500 526 ntBASIC4.51□□□□□ -1.69
RIF1Q5UIP0 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.51□□□□□ -1.69
RIF1Q5UIP0 AC026403.1-201ENST00000518938 295 ntBASIC4.51□□□□□ -1.69
RIF1Q5UIP0 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.51□□□□□ -1.69
RIF1Q5UIP0 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.51□□□□□ -1.69
RIF1Q5UIP0 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RIF1Q5UIP0 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
RIF1Q5UIP0 EIF2AP4-201ENST00000424793 1781 ntBASIC4.51□□□□□ -1.69
RIF1Q5UIP0 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RIF1Q5UIP0 CASC19-204ENST00000641001 2055 ntBASIC4.51□□□□□ -1.69
RIF1Q5UIP0 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC4.51□□□□□ -1.69
RIF1Q5UIP0 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
RIF1Q5UIP0 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
RIF1Q5UIP0 SNORA70H-201ENST00000383910 135 ntBASIC4.51□□□□□ -1.69
RIF1Q5UIP0 SNORA70J-201ENST00000384182 135 ntBASIC4.51□□□□□ -1.69
RIF1Q5UIP0 TBCAP2-201ENST00000416175 326 ntBASIC4.51□□□□□ -1.69
RIF1Q5UIP0 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.51□□□□□ -1.69
RIF1Q5UIP0 SLC25A51P1-201ENST00000468432 871 ntBASIC4.51□□□□□ -1.69
RIF1Q5UIP0 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RIF1Q5UIP0 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.51□□□□□ -1.69
RIF1Q5UIP0 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.51□□□□□ -1.69
RIF1Q5UIP0 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.51□□□□□ -1.69
RIF1Q5UIP0 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
RIF1Q5UIP0 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.51□□□□□ -1.69
RIF1Q5UIP0 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
RIF1Q5UIP0 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 AC130364.2-201ENST00000528639 604 ntBASIC4.5□□□□□ -1.69
RIF1Q5UIP0 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 MRPS21P3-201ENST00000436696 262 ntBASIC4.5□□□□□ -1.69
RIF1Q5UIP0 AL157884.3-201ENST00000448273 1184 ntBASIC4.5□□□□□ -1.69
RIF1Q5UIP0 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 AC091868.1-201ENST00000508746 304 ntBASIC4.5□□□□□ -1.69
RIF1Q5UIP0 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 AL138721.1-201ENST00000616756 179 ntBASIC4.5□□□□□ -1.69
RIF1Q5UIP0 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
RIF1Q5UIP0 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
RIF1Q5UIP0 CASC19-243ENST00000641588 1546 ntBASIC4.49□□□□□ -1.69
RIF1Q5UIP0 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.49□□□□□ -1.69
RIF1Q5UIP0 RPL21P17-201ENST00000397467 475 ntBASIC4.49□□□□□ -1.69
RIF1Q5UIP0 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.49□□□□□ -1.69
RIF1Q5UIP0 RPL23AP38-201ENST00000423801 469 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms