Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
FOXF1Q12946 XKRY2-202ENST00000623874 1581 ntBASIC4.19□□□□□ -1.74
FOXF1Q12946 XKRY-202ENST00000624960 1581 ntBASIC4.19□□□□□ -1.74
FOXF1Q12946 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
FOXF1Q12946 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
FOXF1Q12946 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
FOXF1Q12946 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
FOXF1Q12946 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
FOXF1Q12946 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.18□□□□□ -1.74
FOXF1Q12946 AL359265.2-201ENST00000434367 631 ntBASIC4.18□□□□□ -1.74
FOXF1Q12946 AL935212.3-201ENST00000450729 284 ntBASIC4.18□□□□□ -1.74
FOXF1Q12946 CEACAMP6-201ENST00000452007 574 ntBASIC4.18□□□□□ -1.74
FOXF1Q12946 SBDSP1-204ENST00000453858 737 ntBASIC4.18□□□□□ -1.74
FOXF1Q12946 AC010326.1-201ENST00000462726 602 ntBASIC4.18□□□□□ -1.74
FOXF1Q12946 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.18□□□□□ -1.74
FOXF1Q12946 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.18□□□□□ -1.74
FOXF1Q12946 RPS4XP18-201ENST00000495480 763 ntBASIC4.18□□□□□ -1.74
FOXF1Q12946 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.18□□□□□ -1.74
FOXF1Q12946 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.18□□□□□ -1.74
FOXF1Q12946 AC007016.1-201ENST00000512110 244 ntBASIC4.18□□□□□ -1.74
FOXF1Q12946 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.18□□□□□ -1.74
FOXF1Q12946 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.18□□□□□ -1.74
FOXF1Q12946 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.18□□□□□ -1.74
FOXF1Q12946 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.18□□□□□ -1.74
FOXF1Q12946 BNIP3P32-201ENST00000600015 554 ntBASIC4.18□□□□□ -1.74
FOXF1Q12946 AC068790.7-201ENST00000602347 528 ntBASIC4.18□□□□□ -1.74
FOXF1Q12946 AC008536.1-201ENST00000602872 669 ntBASIC4.18□□□□□ -1.74
FOXF1Q12946 AC087283.1-201ENST00000604029 1074 ntBASIC4.18□□□□□ -1.74
FOXF1Q12946 AL133338.2-201ENST00000604292 736 ntBASIC4.18□□□□□ -1.74
FOXF1Q12946 COX6CP4-201ENST00000605798 228 ntBASIC4.18□□□□□ -1.74
FOXF1Q12946 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.18□□□□□ -1.74
FOXF1Q12946 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
FOXF1Q12946 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.18□□□□□ -1.74
FOXF1Q12946 AC073429.2-201ENST00000569694 1444 ntBASIC4.18□□□□□ -1.74
FOXF1Q12946 OR51C1P-202ENST00000641159 1444 ntBASIC4.18□□□□□ -1.74
FOXF1Q12946 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.18□□□□□ -1.74
FOXF1Q12946 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
FOXF1Q12946 AL672167.1-203ENST00000641299 2975 ntBASIC4.17□□□□□ -1.74
FOXF1Q12946 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
FOXF1Q12946 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
FOXF1Q12946 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXF1Q12946 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
FOXF1Q12946 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXF1Q12946 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
FOXF1Q12946 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXF1Q12946 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXF1Q12946 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
FOXF1Q12946 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.17□□□□□ -1.74
FOXF1Q12946 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
FOXF1Q12946 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXF1Q12946 RNU4-44P-201ENST00000363050 141 ntBASIC4.17□□□□□ -1.74
FOXF1Q12946 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
FOXF1Q12946 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
FOXF1Q12946 MIR585-201ENST00000384887 94 ntBASIC4.17□□□□□ -1.74
FOXF1Q12946 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
FOXF1Q12946 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXF1Q12946 AL049697.2-201ENST00000403708 294 ntBASIC4.17□□□□□ -1.74
FOXF1Q12946 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
FOXF1Q12946 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.17□□□□□ -1.74
FOXF1Q12946 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.17□□□□□ -1.74
FOXF1Q12946 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.17□□□□□ -1.74
FOXF1Q12946 Z74021.1-201ENST00000423610 407 ntBASIC4.17□□□□□ -1.74
FOXF1Q12946 RPL21P43-201ENST00000425440 472 ntBASIC4.17□□□□□ -1.74
FOXF1Q12946 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.17□□□□□ -1.74
FOXF1Q12946 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.17□□□□□ -1.74
FOXF1Q12946 AC022795.1-201ENST00000473808 480 ntBASIC4.17□□□□□ -1.74
FOXF1Q12946 AC008897.1-201ENST00000494006 347 ntBASIC4.17□□□□□ -1.74
FOXF1Q12946 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
FOXF1Q12946 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.17□□□□□ -1.74
FOXF1Q12946 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.17□□□□□ -1.74
FOXF1Q12946 RN7SKP46-201ENST00000515942 234 ntBASIC4.17□□□□□ -1.74
FOXF1Q12946 OR10D4P-201ENST00000525892 951 ntBASIC4.17□□□□□ -1.74
FOXF1Q12946 AP006289.1-201ENST00000538089 277 ntBASIC4.17□□□□□ -1.74
FOXF1Q12946 AC063949.1-201ENST00000552900 865 ntBASIC4.17□□□□□ -1.74
FOXF1Q12946 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXF1Q12946 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.17□□□□□ -1.74
FOXF1Q12946 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.17□□□□□ -1.74
FOXF1Q12946 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXF1Q12946 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.17□□□□□ -1.74
FOXF1Q12946 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXF1Q12946 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXF1Q12946 IMMP1LP1-201ENST00000605170 488 ntBASIC4.17□□□□□ -1.74
FOXF1Q12946 MIR6780A-201ENST00000615089 68 ntBASIC4.17□□□□□ -1.74
FOXF1Q12946 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXF1Q12946 AL596275.2-204ENST00000641628 552 ntBASIC4.17□□□□□ -1.74
FOXF1Q12946 AL596275.2-206ENST00000641957 626 ntBASIC4.17□□□□□ -1.74
FOXF1Q12946 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXF1Q12946 AL133268.1-201ENST00000405676 1401 ntBASIC4.17□□□□□ -1.74
FOXF1Q12946 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXF1Q12946 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXF1Q12946 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXF1Q12946 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
FOXF1Q12946 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.17□□□□□ -1.74
FOXF1Q12946 AC139713.2-215ENST00000641428 5037 ntBASIC4.17□□□□□ -1.74
FOXF1Q12946 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
FOXF1Q12946 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXF1Q12946 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXF1Q12946 AC099654.3-201ENST00000447087 1546 ntBASIC4.16□□□□□ -1.74
FOXF1Q12946 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXF1Q12946 MAPK10-320ENST00000641462 6696 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms