Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.68□□□□□ -1.66
SCN1BQ07699 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.68□□□□□ -1.66
SCN1BQ07699 AC124944.2-201ENST00000429866 1242 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SCN1BQ07699 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.68□□□□□ -1.66
SCN1BQ07699 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.68□□□□□ -1.66
SCN1BQ07699 AL357520.1-201ENST00000441557 453 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 MRPL35P2-201ENST00000448009 511 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.68□□□□□ -1.66
SCN1BQ07699 AL935212.3-201ENST00000450729 284 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.68□□□□□ -1.66
SCN1BQ07699 HMGB3P21-201ENST00000452483 547 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SCN1BQ07699 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.68□□□□□ -1.66
SCN1BQ07699 RPS23P6-201ENST00000466136 431 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SCN1BQ07699 RPS17P15-201ENST00000475609 349 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 TRBV8-2-201ENST00000475637 270 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 RN7SL741P-201ENST00000482473 289 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.68□□□□□ -1.66
SCN1BQ07699 AC027338.1-201ENST00000514840 825 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 RNA5SP464-201ENST00000516251 108 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.68□□□□□ -1.66
SCN1BQ07699 MRPS16P1-201ENST00000523462 412 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 AP003049.1-201ENST00000529418 457 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 AC024405.1-201ENST00000532521 1042 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 UBTFL9-201ENST00000534504 1148 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 TOMM20P1-201ENST00000534518 427 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.68□□□□□ -1.66
SCN1BQ07699 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.68□□□□□ -1.66
SCN1BQ07699 OR4U1P-201ENST00000554958 912 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 MIR4271-201ENST00000582451 67 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 AC006946.3-201ENST00000609791 756 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 AC131238.1-201ENST00000617135 328 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 AC097372.4-201ENST00000625025 466 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.68□□□□□ -1.66
SCN1BQ07699 CFTRP2-201ENST00000634304 199 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 MTCO1P18-201ENST00000455518 1419 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SCN1BQ07699 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.68□□□□□ -1.66
SCN1BQ07699 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
SCN1BQ07699 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SCN1BQ07699 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.68□□□□□ -1.66
SCN1BQ07699 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SCN1BQ07699 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SCN1BQ07699 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.68□□□□□ -1.66
SCN1BQ07699 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.67□□□□□ -1.66
SCN1BQ07699 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SCN1BQ07699 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
SCN1BQ07699 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SCN1BQ07699 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SCN1BQ07699 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.67□□□□□ -1.66
SCN1BQ07699 AC114786.1-201ENST00000512892 1415 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SCN1BQ07699 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SCN1BQ07699 OR52B3P-201ENST00000314715 928 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.67□□□□□ -1.66
SCN1BQ07699 MIR16-2-201ENST00000362117 81 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.67□□□□□ -1.66
SCN1BQ07699 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.67□□□□□ -1.66
SCN1BQ07699 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.67□□□□□ -1.66
SCN1BQ07699 ATP5F1P6-201ENST00000402768 767 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.67□□□□□ -1.66
SCN1BQ07699 AL596448.1-201ENST00000415024 392 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 AL158050.1-201ENST00000416077 457 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 AC092570.3-201ENST00000420113 693 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SCN1BQ07699 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.67□□□□□ -1.66
SCN1BQ07699 AKR1B10P1-201ENST00000425765 942 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SCN1BQ07699 AC127526.2-201ENST00000426436 775 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.67□□□□□ -1.66
SCN1BQ07699 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.67□□□□□ -1.66
SCN1BQ07699 YWHAQP9-201ENST00000445891 512 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.67□□□□□ -1.66
SCN1BQ07699 RPL37P3-201ENST00000456825 293 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.67□□□□□ -1.66
SCN1BQ07699 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.67□□□□□ -1.66
SCN1BQ07699 ARL4AP1-201ENST00000503220 705 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.67□□□□□ -1.66
SCN1BQ07699 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.67□□□□□ -1.66
SCN1BQ07699 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.67□□□□□ -1.66
SCN1BQ07699 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SCN1BQ07699 SNORD116-26-201ENST00000516006 96 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 RNU6-615P-201ENST00000516065 106 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 RN7SKP99-201ENST00000517028 307 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 SNORA43.3-201ENST00000517240 103 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.67□□□□□ -1.66
SCN1BQ07699 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.67□□□□□ -1.66
SCN1BQ07699 AC104229.1-201ENST00000561364 255 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 AC090751.1-201ENST00000566966 267 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.67□□□□□ -1.66
SCN1BQ07699 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.67□□□□□ -1.66
SCN1BQ07699 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.67□□□□□ -1.66
SCN1BQ07699 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.67□□□□□ -1.66
SCN1BQ07699 AC097505.1-201ENST00000610199 565 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 RMST_10.1-201ENST00000616309 154 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms