Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.35□□□□□ -1.55
NKX6-1P78426 USP9YP26-201ENST00000421008 661 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 AC007559.1-201ENST00000428736 355 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.35□□□□□ -1.55
NKX6-1P78426 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.35□□□□□ -1.55
NKX6-1P78426 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.35□□□□□ -1.55
NKX6-1P78426 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 AC023141.3-201ENST00000436698 278 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 OR3D1P-201ENST00000438288 955 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.35□□□□□ -1.55
NKX6-1P78426 RPL36AP39-201ENST00000445859 318 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 HMGN1P36-201ENST00000446623 298 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 AL034418.1-201ENST00000448675 860 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.35□□□□□ -1.55
NKX6-1P78426 RFC5P1-201ENST00000454419 874 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.35□□□□□ -1.55
NKX6-1P78426 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.35□□□□□ -1.55
NKX6-1P78426 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.35□□□□□ -1.55
NKX6-1P78426 AC023141.9-201ENST00000458734 412 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 RNU6-1218P-201ENST00000458990 108 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.35□□□□□ -1.55
NKX6-1P78426 AC011476.1-201ENST00000466725 307 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NKX6-1P78426 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
NKX6-1P78426 AC005912.1-201ENST00000495392 255 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 AL136038.1-201ENST00000497246 351 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 RN7SL284P-201ENST00000498823 275 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.35□□□□□ -1.55
NKX6-1P78426 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.35□□□□□ -1.55
NKX6-1P78426 MTCYBP16-201ENST00000509187 1129 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 AC048346.1-201ENST00000510247 144 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.35□□□□□ -1.55
NKX6-1P78426 RNA5SP434-201ENST00000516647 121 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.35□□□□□ -1.55
NKX6-1P78426 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.35□□□□□ -1.55
NKX6-1P78426 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.35□□□□□ -1.55
NKX6-1P78426 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NKX6-1P78426 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.35□□□□□ -1.55
NKX6-1P78426 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.35□□□□□ -1.55
NKX6-1P78426 AC112191.2-201ENST00000522428 333 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.35□□□□□ -1.55
NKX6-1P78426 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.35□□□□□ -1.55
NKX6-1P78426 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.35□□□□□ -1.55
NKX6-1P78426 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.35□□□□□ -1.55
NKX6-1P78426 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.35□□□□□ -1.55
NKX6-1P78426 AC079600.1-201ENST00000550326 297 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 HIGD1AP17-201ENST00000554576 276 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.35□□□□□ -1.55
NKX6-1P78426 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.35□□□□□ -1.55
NKX6-1P78426 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.35□□□□□ -1.55
NKX6-1P78426 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.35□□□□□ -1.55
NKX6-1P78426 AC016180.1-201ENST00000567945 403 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 MIR3189-201ENST00000578735 73 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 AC027229.1-201ENST00000583887 253 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
NKX6-1P78426 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.35□□□□□ -1.55
NKX6-1P78426 AL451064.1-201ENST00000607718 471 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NKX6-1P78426 AL512652.1-201ENST00000619006 500 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.35□□□□□ -1.55
NKX6-1P78426 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.35□□□□□ -1.55
NKX6-1P78426 AC068620.4-201ENST00000636730 1182 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 AC007671.2-201ENST00000637344 619 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NKX6-1P78426 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
NKX6-1P78426 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NKX6-1P78426 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.35□□□□□ -1.55
NKX6-1P78426 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NKX6-1P78426 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.35□□□□□ -1.55
NKX6-1P78426 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.35□□□□□ -1.55
NKX6-1P78426 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.35□□□□□ -1.55
NKX6-1P78426 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NKX6-1P78426 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
NKX6-1P78426 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NKX6-1P78426 AC024651.2-201ENST00000562480 2098 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.35□□□□□ -1.55
NKX6-1P78426 AC092724.1-201ENST00000624623 3397 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.35□□□□□ -1.55
NKX6-1P78426 AC092079.1-201ENST00000558620 1985 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.35□□□□□ -1.55
NKX6-1P78426 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.35□□□□□ -1.55
NKX6-1P78426 AC096921.2-201ENST00000561507 1916 ntBASIC5.35□□□□□ -1.55
NKX6-1P78426 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
NKX6-1P78426 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NKX6-1P78426 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NKX6-1P78426 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NKX6-1P78426 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NKX6-1P78426 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.34□□□□□ -1.55
NKX6-1P78426 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
NKX6-1P78426 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NKX6-1P78426 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NKX6-1P78426 AC087516.1-201ENST00000561236 2428 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.34□□□□□ -1.55
NKX6-1P78426 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NKX6-1P78426 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NKX6-1P78426 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NKX6-1P78426 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.34□□□□□ -1.55
NKX6-1P78426 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
NKX6-1P78426 AL512646.1-201ENST00000269395 1077 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms