Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.5□□□□□ -1.53
CCNA1P78396 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.5□□□□□ -1.53
CCNA1P78396 AC006272.2-201ENST00000594725 163 ntBASIC5.5□□□□□ -1.53
CCNA1P78396 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.5□□□□□ -1.53
CCNA1P78396 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCNA1P78396 AL020997.2-201ENST00000602607 184 ntBASIC5.5□□□□□ -1.53
CCNA1P78396 AC020910.2-201ENST00000603635 610 ntBASIC5.5□□□□□ -1.53
CCNA1P78396 MLECP1-201ENST00000615893 709 ntBASIC5.5□□□□□ -1.53
CCNA1P78396 AL022401.1-201ENST00000619498 108 ntBASIC5.5□□□□□ -1.53
CCNA1P78396 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.5□□□□□ -1.53
CCNA1P78396 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.49□□□□□ -1.53
CCNA1P78396 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CCNA1P78396 MFSD8-220ENST00000641243 1422 ntBASIC5.49□□□□□ -1.53
CCNA1P78396 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CCNA1P78396 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CCNA1P78396 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCNA1P78396 SNORA5.1-201ENST00000384275 131 ntBASIC5.49□□□□□ -1.53
CCNA1P78396 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCNA1P78396 U3.32-201ENST00000408116 212 ntBASIC5.49□□□□□ -1.53
CCNA1P78396 SMC4P1-201ENST00000414479 527 ntBASIC5.49□□□□□ -1.53
CCNA1P78396 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.49□□□□□ -1.53
CCNA1P78396 AL592293.2-201ENST00000422292 996 ntBASIC5.49□□□□□ -1.53
CCNA1P78396 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.49□□□□□ -1.53
CCNA1P78396 AC023141.6-201ENST00000429418 337 ntBASIC5.49□□□□□ -1.53
CCNA1P78396 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.49□□□□□ -1.53
CCNA1P78396 AL606490.8-201ENST00000441624 319 ntBASIC5.49□□□□□ -1.53
CCNA1P78396 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.49□□□□□ -1.53
CCNA1P78396 RN7SL517P-201ENST00000462240 305 ntBASIC5.49□□□□□ -1.53
CCNA1P78396 PPIAP21-201ENST00000464473 501 ntBASIC5.49□□□□□ -1.53
CCNA1P78396 RN7SL558P-201ENST00000497468 299 ntBASIC5.49□□□□□ -1.53
CCNA1P78396 AC083829.1-201ENST00000503756 657 ntBASIC5.49□□□□□ -1.53
CCNA1P78396 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.49□□□□□ -1.53
CCNA1P78396 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.49□□□□□ -1.53
CCNA1P78396 AC027369.5-201ENST00000533838 755 ntBASIC5.49□□□□□ -1.53
CCNA1P78396 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
CCNA1P78396 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.49□□□□□ -1.53
CCNA1P78396 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.49□□□□□ -1.53
CCNA1P78396 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.49□□□□□ -1.53
CCNA1P78396 AC116553.2-201ENST00000564203 463 ntBASIC5.49□□□□□ -1.53
CCNA1P78396 RN7SL652P-201ENST00000577769 300 ntBASIC5.49□□□□□ -1.53
CCNA1P78396 MTCYBP13-201ENST00000578634 1093 ntBASIC5.49□□□□□ -1.53
CCNA1P78396 AC002069.2-201ENST00000603580 883 ntBASIC5.49□□□□□ -1.53
CCNA1P78396 AC006363.1-201ENST00000603806 463 ntBASIC5.49□□□□□ -1.53
CCNA1P78396 AL121873.1-201ENST00000616013 524 ntBASIC5.49□□□□□ -1.53
CCNA1P78396 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
CCNA1P78396 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCNA1P78396 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCNA1P78396 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCNA1P78396 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCNA1P78396 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCNA1P78396 TLK1P1-201ENST00000456760 2440 ntBASIC5.48□□□□□ -1.53
CCNA1P78396 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CCNA1P78396 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.48□□□□□ -1.53
CCNA1P78396 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCNA1P78396 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
CCNA1P78396 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCNA1P78396 RNA5SP296-201ENST00000410523 111 ntBASIC5.48□□□□□ -1.53
CCNA1P78396 RNU4-25P-201ENST00000410569 230 ntBASIC5.48□□□□□ -1.53
CCNA1P78396 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.48□□□□□ -1.53
CCNA1P78396 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.48□□□□□ -1.53
CCNA1P78396 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.48□□□□□ -1.53
CCNA1P78396 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.48□□□□□ -1.53
CCNA1P78396 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.48□□□□□ -1.53
CCNA1P78396 RAB9AP5-201ENST00000437794 597 ntBASIC5.48□□□□□ -1.53
CCNA1P78396 RAB9AP2-201ENST00000443911 597 ntBASIC5.48□□□□□ -1.53
CCNA1P78396 HSPE1P22-201ENST00000456856 327 ntBASIC5.48□□□□□ -1.53
CCNA1P78396 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CCNA1P78396 ENPP7P11-201ENST00000505915 627 ntBASIC5.48□□□□□ -1.53
CCNA1P78396 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.48□□□□□ -1.53
CCNA1P78396 AC016559.2-201ENST00000510759 359 ntBASIC5.48□□□□□ -1.53
CCNA1P78396 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.48□□□□□ -1.53
CCNA1P78396 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.48□□□□□ -1.53
CCNA1P78396 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.48□□□□□ -1.53
CCNA1P78396 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.48□□□□□ -1.53
CCNA1P78396 AL035461.2-201ENST00000619201 524 ntBASIC5.48□□□□□ -1.53
CCNA1P78396 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.48□□□□□ -1.53
CCNA1P78396 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.48□□□□□ -1.53
CCNA1P78396 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCNA1P78396 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCNA1P78396 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCNA1P78396 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
CCNA1P78396 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCNA1P78396 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.47□□□□□ -1.53
CCNA1P78396 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCNA1P78396 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.47□□□□□ -1.53
CCNA1P78396 AC006971.1-201ENST00000407916 4486 ntBASIC5.47□□□□□ -1.53
CCNA1P78396 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCNA1P78396 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CCNA1P78396 AL031595.2-201ENST00000624215 19071 ntBASIC5.47□□□□□ -1.53
CCNA1P78396 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCNA1P78396 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.47□□□□□ -1.53
CCNA1P78396 SNORA71.2-201ENST00000364941 134 ntBASIC5.47□□□□□ -1.53
CCNA1P78396 OR13C3-201ENST00000374781 1108 ntBASIC5.47□□□□□ -1.53
CCNA1P78396 AC233289.1-201ENST00000403700 508 ntBASIC5.47□□□□□ -1.53
CCNA1P78396 AL591848.1-201ENST00000413092 322 ntBASIC5.47□□□□□ -1.53
CCNA1P78396 QRSL1P2-201ENST00000418582 964 ntBASIC5.47□□□□□ -1.53
CCNA1P78396 RPEP3-201ENST00000425462 676 ntBASIC5.47□□□□□ -1.53
CCNA1P78396 AC234779.1-201ENST00000425910 285 ntBASIC5.47□□□□□ -1.53
CCNA1P78396 AL732292.1-201ENST00000426692 226 ntBASIC5.47□□□□□ -1.53
CCNA1P78396 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms