Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RPL12P43-201ENST00000420608 499 ntBASIC5.18□□□□□ -1.58
TPM4P67936 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TPM4P67936 AL121776.1-201ENST00000429337 372 ntBASIC5.18□□□□□ -1.58
TPM4P67936 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.18□□□□□ -1.58
TPM4P67936 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.18□□□□□ -1.58
TPM4P67936 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TPM4P67936 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.18□□□□□ -1.58
TPM4P67936 NPM1P39-201ENST00000449818 867 ntBASIC5.18□□□□□ -1.58
TPM4P67936 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.18□□□□□ -1.58
TPM4P67936 AL606490.1-201ENST00000452266 765 ntBASIC5.18□□□□□ -1.58
TPM4P67936 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.18□□□□□ -1.58
TPM4P67936 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.18□□□□□ -1.58
TPM4P67936 RPS18P6-201ENST00000476880 458 ntBASIC5.18□□□□□ -1.58
TPM4P67936 AC140172.1-201ENST00000502928 141 ntBASIC5.18□□□□□ -1.58
TPM4P67936 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.18□□□□□ -1.58
TPM4P67936 OR51K1P-201ENST00000510214 950 ntBASIC5.18□□□□□ -1.58
TPM4P67936 RNA5SP446-201ENST00000515955 82 ntBASIC5.18□□□□□ -1.58
TPM4P67936 RNA5SP154-201ENST00000516193 111 ntBASIC5.18□□□□□ -1.58
TPM4P67936 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.18□□□□□ -1.58
TPM4P67936 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TPM4P67936 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TPM4P67936 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.18□□□□□ -1.58
TPM4P67936 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.18□□□□□ -1.58
TPM4P67936 AC023509.5-201ENST00000617434 807 ntBASIC5.18□□□□□ -1.58
TPM4P67936 AC091905.2-201ENST00000623143 306 ntBASIC5.18□□□□□ -1.58
TPM4P67936 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.18□□□□□ -1.58
TPM4P67936 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.18□□□□□ -1.58
TPM4P67936 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
TPM4P67936 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TPM4P67936 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
TPM4P67936 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TPM4P67936 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TPM4P67936 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
TPM4P67936 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TPM4P67936 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TPM4P67936 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
TPM4P67936 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
TPM4P67936 RNA5SP242-201ENST00000364171 118 ntBASIC5.17□□□□□ -1.58
TPM4P67936 RNA5SP22-201ENST00000365393 109 ntBASIC5.17□□□□□ -1.58
TPM4P67936 RNU6-1320P-201ENST00000390838 107 ntBASIC5.17□□□□□ -1.58
TPM4P67936 RNU6-1269P-201ENST00000391139 107 ntBASIC5.17□□□□□ -1.58
TPM4P67936 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TPM4P67936 FCF1P5-201ENST00000406490 482 ntBASIC5.17□□□□□ -1.58
TPM4P67936 OR51A6P-201ENST00000418680 1004 ntBASIC5.17□□□□□ -1.58
TPM4P67936 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.17□□□□□ -1.58
TPM4P67936 RNU6-599P-201ENST00000459383 107 ntBASIC5.17□□□□□ -1.58
TPM4P67936 RNU6-1193P-201ENST00000459461 107 ntBASIC5.17□□□□□ -1.58
TPM4P67936 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.17□□□□□ -1.58
TPM4P67936 AGGF1P3-201ENST00000493675 1213 ntBASIC5.17□□□□□ -1.58
TPM4P67936 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.17□□□□□ -1.58
TPM4P67936 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.17□□□□□ -1.58
TPM4P67936 AC011411.1-201ENST00000509592 876 ntBASIC5.17□□□□□ -1.58
TPM4P67936 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.17□□□□□ -1.58
TPM4P67936 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.17□□□□□ -1.58
TPM4P67936 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TPM4P67936 MIR3614-201ENST00000581261 86 ntBASIC5.17□□□□□ -1.58
TPM4P67936 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.17□□□□□ -1.58
TPM4P67936 AC020910.3-201ENST00000603701 874 ntBASIC5.17□□□□□ -1.58
TPM4P67936 IMMP1LP3-201ENST00000604197 224 ntBASIC5.17□□□□□ -1.58
TPM4P67936 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.17□□□□□ -1.58
TPM4P67936 AC093799.2-201ENST00000610062 578 ntBASIC5.17□□□□□ -1.58
TPM4P67936 FAM27B-201ENST00000610601 213 ntBASIC5.17□□□□□ -1.58
TPM4P67936 EIF3FP1-201ENST00000613970 806 ntBASIC5.17□□□□□ -1.58
TPM4P67936 RNU6-368P-201ENST00000620928 107 ntBASIC5.17□□□□□ -1.58
TPM4P67936 RNU6-538P-201ENST00000622329 107 ntBASIC5.17□□□□□ -1.58
TPM4P67936 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TPM4P67936 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.17□□□□□ -1.58
TPM4P67936 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.17□□□□□ -1.58
TPM4P67936 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.17□□□□□ -1.58
TPM4P67936 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
TPM4P67936 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TPM4P67936 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TPM4P67936 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TPM4P67936 CR383656.5-201ENST00000547616 1340 ntBASIC5.17□□□□□ -1.58
TPM4P67936 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TPM4P67936 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC5.16□□□□□ -1.58
TPM4P67936 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TPM4P67936 OR10J6P-201ENST00000289731 930 ntBASIC5.16□□□□□ -1.58
TPM4P67936 RN7SKP160-201ENST00000363804 340 ntBASIC5.16□□□□□ -1.58
TPM4P67936 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
TPM4P67936 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.16□□□□□ -1.58
TPM4P67936 AL672167.2-201ENST00000377164 879 ntBASIC5.16□□□□□ -1.58
TPM4P67936 MIR1286-201ENST00000408112 78 ntBASIC5.16□□□□□ -1.58
TPM4P67936 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.16□□□□□ -1.58
TPM4P67936 RNA5SP104-201ENST00000410989 118 ntBASIC5.16□□□□□ -1.58
TPM4P67936 AL591848.1-201ENST00000413092 322 ntBASIC5.16□□□□□ -1.58
TPM4P67936 GJA6P-201ENST00000415117 1042 ntBASIC5.16□□□□□ -1.58
TPM4P67936 DYNLL1P7-201ENST00000429273 258 ntBASIC5.16□□□□□ -1.58
TPM4P67936 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.16□□□□□ -1.58
TPM4P67936 NPM1P48-201ENST00000436002 853 ntBASIC5.16□□□□□ -1.58
TPM4P67936 RHOT1P3-201ENST00000436571 331 ntBASIC5.16□□□□□ -1.58
TPM4P67936 AC011753.3-201ENST00000443436 406 ntBASIC5.16□□□□□ -1.58
TPM4P67936 H2AFZP5-201ENST00000446960 382 ntBASIC5.16□□□□□ -1.58
TPM4P67936 RPS27AP15-201ENST00000447672 466 ntBASIC5.16□□□□□ -1.58
TPM4P67936 AC079168.2-201ENST00000453977 416 ntBASIC5.16□□□□□ -1.58
TPM4P67936 RN7SL172P-201ENST00000460535 303 ntBASIC5.16□□□□□ -1.58
TPM4P67936 AC107015.1-201ENST00000466902 747 ntBASIC5.16□□□□□ -1.58
TPM4P67936 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TPM4P67936 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.16□□□□□ -1.58
TPM4P67936 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms