Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
UBA52P62987 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
UBA52P62987 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
UBA52P62987 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
UBA52P62987 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
UBA52P62987 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
UBA52P62987 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.16□□□□□ -1.74
UBA52P62987 AC068446.1-201ENST00000556425 1549 ntBASIC4.16□□□□□ -1.74
UBA52P62987 MTND4P26-201ENST00000415971 1359 ntBASIC4.16□□□□□ -1.74
UBA52P62987 HCFC2P1-201ENST00000392864 1592 ntBASIC4.16□□□□□ -1.74
UBA52P62987 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
UBA52P62987 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
UBA52P62987 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
UBA52P62987 AC008549.2-201ENST00000333482 706 ntBASIC4.16□□□□□ -1.74
UBA52P62987 VDAC1P9-201ENST00000412766 841 ntBASIC4.16□□□□□ -1.74
UBA52P62987 EIF2S2P3-201ENST00000428356 999 ntBASIC4.16□□□□□ -1.74
UBA52P62987 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.16□□□□□ -1.74
UBA52P62987 RPS29P10-201ENST00000439197 166 ntBASIC4.16□□□□□ -1.74
UBA52P62987 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.16□□□□□ -1.74
UBA52P62987 AC004980.3-201ENST00000447046 365 ntBASIC4.16□□□□□ -1.74
UBA52P62987 RN7SL481P-201ENST00000477764 299 ntBASIC4.16□□□□□ -1.74
UBA52P62987 AC008897.1-201ENST00000494006 347 ntBASIC4.16□□□□□ -1.74
UBA52P62987 RN7SL558P-201ENST00000497468 299 ntBASIC4.16□□□□□ -1.74
UBA52P62987 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.16□□□□□ -1.74
UBA52P62987 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.16□□□□□ -1.74
UBA52P62987 AC021006.3-201ENST00000530771 192 ntBASIC4.16□□□□□ -1.74
UBA52P62987 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.16□□□□□ -1.74
UBA52P62987 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.16□□□□□ -1.74
UBA52P62987 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.16□□□□□ -1.74
UBA52P62987 AP005119.2-201ENST00000579735 1105 ntBASIC4.16□□□□□ -1.74
UBA52P62987 MIR4270-201ENST00000581799 70 ntBASIC4.16□□□□□ -1.74
UBA52P62987 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.16□□□□□ -1.74
UBA52P62987 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.16□□□□□ -1.74
UBA52P62987 AC234771.5-201ENST00000600161 514 ntBASIC4.16□□□□□ -1.74
UBA52P62987 AL031320.1-201ENST00000604177 357 ntBASIC4.16□□□□□ -1.74
UBA52P62987 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.16□□□□□ -1.74
UBA52P62987 MTCO1P1-201ENST00000624263 1081 ntBASIC4.16□□□□□ -1.74
UBA52P62987 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.16□□□□□ -1.74
UBA52P62987 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.16□□□□□ -1.74
UBA52P62987 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.16□□□□□ -1.74
UBA52P62987 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
UBA52P62987 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
UBA52P62987 Z98755.1-201ENST00000407015 1384 ntBASIC4.15□□□□□ -1.74
UBA52P62987 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.15□□□□□ -1.74
UBA52P62987 MAPK10-263ENST00000641052 4307 ntBASIC4.15□□□□□ -1.74
UBA52P62987 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
UBA52P62987 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.15□□□□□ -1.74
UBA52P62987 AC027290.2-201ENST00000623210 18662 ntBASIC4.15□□□□□ -1.74
UBA52P62987 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
UBA52P62987 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.15□□□□□ -1.75
UBA52P62987 SNORA66-201ENST00000384792 133 ntBASIC4.15□□□□□ -1.75
UBA52P62987 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.15□□□□□ -1.75
UBA52P62987 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.15□□□□□ -1.75
UBA52P62987 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.15□□□□□ -1.75
UBA52P62987 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.15□□□□□ -1.75
UBA52P62987 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.15□□□□□ -1.75
UBA52P62987 AC140172.1-201ENST00000502928 141 ntBASIC4.15□□□□□ -1.75
UBA52P62987 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.15□□□□□ -1.75
UBA52P62987 HMGB3P13-201ENST00000511263 607 ntBASIC4.15□□□□□ -1.75
UBA52P62987 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.15□□□□□ -1.75
UBA52P62987 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.15□□□□□ -1.75
UBA52P62987 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.15□□□□□ -1.75
UBA52P62987 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.15□□□□□ -1.75
UBA52P62987 CYCSP28-201ENST00000534284 321 ntBASIC4.15□□□□□ -1.75
UBA52P62987 AC008147.3-201ENST00000548666 354 ntBASIC4.15□□□□□ -1.75
UBA52P62987 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.15□□□□□ -1.75
UBA52P62987 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.15□□□□□ -1.75
UBA52P62987 AC015813.4-201ENST00000610469 179 ntBASIC4.15□□□□□ -1.75
UBA52P62987 AL627230.1-201ENST00000613077 211 ntBASIC4.15□□□□□ -1.75
UBA52P62987 AL591926.8-201ENST00000616876 211 ntBASIC4.15□□□□□ -1.75
UBA52P62987 LINC00901.1-201ENST00000617252 152 ntBASIC4.15□□□□□ -1.75
UBA52P62987 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
UBA52P62987 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
UBA52P62987 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.15□□□□□ -1.75
UBA52P62987 MIR7641-1-201ENST00000627518 61 ntBASIC4.15□□□□□ -1.75
UBA52P62987 AC132825.1-201ENST00000463573 2247 ntBASIC4.15□□□□□ -1.75
UBA52P62987 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.15□□□□□ -1.75
UBA52P62987 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
UBA52P62987 AC026951.1-201ENST00000559530 2459 ntBASIC4.15□□□□□ -1.75
UBA52P62987 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
UBA52P62987 EOGT-210ENST00000615922 1931 ntBASIC4.15□□□□□ -1.75
UBA52P62987 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
UBA52P62987 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.15□□□□□ -1.75
UBA52P62987 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
UBA52P62987 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
UBA52P62987 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
UBA52P62987 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.14□□□□□ -1.75
UBA52P62987 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.14□□□□□ -1.75
UBA52P62987 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
UBA52P62987 SDAD1P1-202ENST00000524156 2051 ntBASIC4.14□□□□□ -1.75
UBA52P62987 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.14□□□□□ -1.75
UBA52P62987 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.14□□□□□ -1.75
UBA52P62987 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
UBA52P62987 RNA5SP90-201ENST00000364801 99 ntBASIC4.14□□□□□ -1.75
UBA52P62987 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UBA52P62987 OR8V1P-201ENST00000395193 873 ntBASIC4.14□□□□□ -1.75
UBA52P62987 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UBA52P62987 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.14□□□□□ -1.75
UBA52P62987 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.14□□□□□ -1.75
UBA52P62987 AC093414.1-201ENST00000434712 514 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms