Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC009117.1-201ENST00000563948 554 ntBASIC4.92□□□□□ -1.62
CDH6P55285 AL390726.5-202ENST00000564800 256 ntBASIC4.92□□□□□ -1.62
CDH6P55285 MIR4675-201ENST00000577898 77 ntBASIC4.92□□□□□ -1.62
CDH6P55285 RNF138P2-201ENST00000603490 592 ntBASIC4.92□□□□□ -1.62
CDH6P55285 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH6P55285 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH6P55285 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH6P55285 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDH6P55285 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH6P55285 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH6P55285 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CDH6P55285 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.92□□□□□ -1.62
CDH6P55285 AL442639.1-201ENST00000625030 1899 ntBASIC4.92□□□□□ -1.62
CDH6P55285 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH6P55285 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.91□□□□□ -1.62
CDH6P55285 RLIMP2-201ENST00000427891 1563 ntBASIC4.91□□□□□ -1.62
CDH6P55285 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH6P55285 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH6P55285 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH6P55285 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH6P55285 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CDH6P55285 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH6P55285 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH6P55285 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH6P55285 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH6P55285 RBPJP2-201ENST00000618187 1444 ntBASIC4.91□□□□□ -1.62
CDH6P55285 AL672167.1-203ENST00000641299 2975 ntBASIC4.91□□□□□ -1.62
CDH6P55285 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH6P55285 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH6P55285 RNA5SP191-201ENST00000362585 102 ntBASIC4.91□□□□□ -1.62
CDH6P55285 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH6P55285 GLUD1P9-201ENST00000420997 1173 ntBASIC4.91□□□□□ -1.62
CDH6P55285 MTCO1P51-201ENST00000427672 1060 ntBASIC4.91□□□□□ -1.62
CDH6P55285 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.91□□□□□ -1.62
CDH6P55285 RPL31P44-201ENST00000447680 377 ntBASIC4.91□□□□□ -1.62
CDH6P55285 AC079168.2-201ENST00000453977 416 ntBASIC4.91□□□□□ -1.62
CDH6P55285 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.91□□□□□ -1.62
CDH6P55285 MTND6P32-201ENST00000457611 483 ntBASIC4.91□□□□□ -1.62
CDH6P55285 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.91□□□□□ -1.62
CDH6P55285 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH6P55285 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.91□□□□□ -1.62
CDH6P55285 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH6P55285 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.91□□□□□ -1.62
CDH6P55285 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH6P55285 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH6P55285 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH6P55285 IMMP1LP1-201ENST00000605170 488 ntBASIC4.91□□□□□ -1.62
CDH6P55285 AL008729.2-201ENST00000606393 473 ntBASIC4.91□□□□□ -1.62
CDH6P55285 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.91□□□□□ -1.62
CDH6P55285 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH6P55285 AC087385.3-201ENST00000620477 187 ntBASIC4.91□□□□□ -1.62
CDH6P55285 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH6P55285 AC139713.2-215ENST00000641428 5037 ntBASIC4.91□□□□□ -1.62
CDH6P55285 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH6P55285 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.91□□□□□ -1.62
CDH6P55285 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH6P55285 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH6P55285 AC007382.1-201ENST00000624376 2618 ntBASIC4.91□□□□□ -1.62
CDH6P55285 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH6P55285 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH6P55285 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH6P55285 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH6P55285 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
CDH6P55285 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
CDH6P55285 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.9□□□□□ -1.62
CDH6P55285 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDH6P55285 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.9□□□□□ -1.62
CDH6P55285 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDH6P55285 AP001642.1-201ENST00000624727 2117 ntBASIC4.9□□□□□ -1.62
CDH6P55285 OR13C3-201ENST00000374781 1108 ntBASIC4.9□□□□□ -1.63
CDH6P55285 UBBP2-201ENST00000376781 231 ntBASIC4.9□□□□□ -1.63
CDH6P55285 AL359643.1-201ENST00000404109 423 ntBASIC4.9□□□□□ -1.63
CDH6P55285 RN7SKP125-201ENST00000410481 302 ntBASIC4.9□□□□□ -1.63
CDH6P55285 RAB9AP4-201ENST00000415230 609 ntBASIC4.9□□□□□ -1.63
CDH6P55285 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH6P55285 RPS27P18-201ENST00000431701 247 ntBASIC4.9□□□□□ -1.63
CDH6P55285 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH6P55285 RPS26P2-201ENST00000440331 348 ntBASIC4.9□□□□□ -1.63
CDH6P55285 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH6P55285 AC073648.4-201ENST00000442655 781 ntBASIC4.9□□□□□ -1.63
CDH6P55285 AC104651.2-201ENST00000447549 528 ntBASIC4.9□□□□□ -1.63
CDH6P55285 OR1H1P-201ENST00000448731 937 ntBASIC4.9□□□□□ -1.63
CDH6P55285 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH6P55285 RPL32P9-201ENST00000487963 407 ntBASIC4.9□□□□□ -1.63
CDH6P55285 RNU4-18P-201ENST00000516751 149 ntBASIC4.9□□□□□ -1.63
CDH6P55285 AP001880.2-201ENST00000538233 448 ntBASIC4.9□□□□□ -1.63
CDH6P55285 AC079075.1-201ENST00000559543 878 ntBASIC4.9□□□□□ -1.63
CDH6P55285 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH6P55285 SNORD39.2-201ENST00000579995 76 ntBASIC4.9□□□□□ -1.63
CDH6P55285 AC073137.1-201ENST00000605636 634 ntBASIC4.9□□□□□ -1.63
CDH6P55285 AL021707.7-201ENST00000607991 416 ntBASIC4.9□□□□□ -1.63
CDH6P55285 OR7A19P-201ENST00000608051 733 ntBASIC4.9□□□□□ -1.63
CDH6P55285 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.9□□□□□ -1.63
CDH6P55285 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.9□□□□□ -1.63
CDH6P55285 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.9□□□□□ -1.63
CDH6P55285 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CDH6P55285 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDH6P55285 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDH6P55285 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.9□□□□□ -1.63
CDH6P55285 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms