Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 NUTF2P3-201ENST00000448540 384 ntBASIC6.43□□□□□ -1.38
CLTCL1P53675 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CLTCL1P53675 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CLTCL1P53675 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC6.43□□□□□ -1.38
CLTCL1P53675 AC105137.1-201ENST00000484355 562 ntBASIC6.43□□□□□ -1.38
CLTCL1P53675 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC6.43□□□□□ -1.38
CLTCL1P53675 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC6.43□□□□□ -1.38
CLTCL1P53675 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.43□□□□□ -1.38
CLTCL1P53675 RN7SL703P-201ENST00000578485 302 ntBASIC6.43□□□□□ -1.38
CLTCL1P53675 AC090948.2-201ENST00000607363 564 ntBASIC6.43□□□□□ -1.38
CLTCL1P53675 RNA5SP196-201ENST00000625967 102 ntBASIC6.43□□□□□ -1.38
CLTCL1P53675 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CLTCL1P53675 ASNSP1-204ENST00000641977 1664 ntBASIC6.43□□□□□ -1.38
CLTCL1P53675 AC005261.4-201ENST00000600047 1385 ntBASIC6.43□□□□□ -1.38
CLTCL1P53675 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CLTCL1P53675 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLTCL1P53675 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLTCL1P53675 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLTCL1P53675 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLTCL1P53675 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CLTCL1P53675 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CLTCL1P53675 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLTCL1P53675 RNU1-132P-201ENST00000364300 164 ntBASIC6.43□□□□□ -1.38
CLTCL1P53675 SNORA37-201ENST00000384504 129 ntBASIC6.43□□□□□ -1.38
CLTCL1P53675 MIR23A-201ENST00000385245 73 ntBASIC6.43□□□□□ -1.38
CLTCL1P53675 AL356095.1-201ENST00000417217 199 ntBASIC6.43□□□□□ -1.38
CLTCL1P53675 COX6CP15-201ENST00000426313 211 ntBASIC6.43□□□□□ -1.38
CLTCL1P53675 RPL21P91-201ENST00000429231 479 ntBASIC6.43□□□□□ -1.38
CLTCL1P53675 EEF1A1P1-201ENST00000447052 739 ntBASIC6.43□□□□□ -1.38
CLTCL1P53675 AC008958.1-201ENST00000511047 682 ntBASIC6.43□□□□□ -1.38
CLTCL1P53675 AC025884.1-201ENST00000556034 378 ntBASIC6.43□□□□□ -1.38
CLTCL1P53675 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.43□□□□□ -1.38
CLTCL1P53675 AL445363.3-201ENST00000623080 671 ntBASIC6.43□□□□□ -1.38
CLTCL1P53675 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLTCL1P53675 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC6.42□□□□□ -1.38
CLTCL1P53675 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC6.42□□□□□ -1.38
CLTCL1P53675 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CLTCL1P53675 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLTCL1P53675 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLTCL1P53675 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
CLTCL1P53675 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLTCL1P53675 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CLTCL1P53675 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CLTCL1P53675 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CLTCL1P53675 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CLTCL1P53675 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC6.42□□□□□ -1.38
CLTCL1P53675 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.42□□□□□ -1.38
CLTCL1P53675 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC6.42□□□□□ -1.38
CLTCL1P53675 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CLTCL1P53675 IGKV3OR22-2-201ENST00000517943 313 ntBASIC6.42□□□□□ -1.38
CLTCL1P53675 PSMB7P1-201ENST00000556349 514 ntBASIC6.42□□□□□ -1.38
CLTCL1P53675 AC024941.1-201ENST00000612250 334 ntBASIC6.42□□□□□ -1.38
CLTCL1P53675 uc_338.13-201ENST00000618243 179 ntBASIC6.42□□□□□ -1.38
CLTCL1P53675 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.42□□□□□ -1.38
CLTCL1P53675 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC6.42□□□□□ -1.38
CLTCL1P53675 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CLTCL1P53675 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLTCL1P53675 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLTCL1P53675 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLTCL1P53675 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLTCL1P53675 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CLTCL1P53675 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLTCL1P53675 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
CLTCL1P53675 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.41□□□□□ -1.38
CLTCL1P53675 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CLTCL1P53675 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CLTCL1P53675 AC139769.1-204ENST00000472297 1931 ntBASIC6.41□□□□□ -1.38
CLTCL1P53675 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CLTCL1P53675 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.41□□□□□ -1.38
CLTCL1P53675 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CLTCL1P53675 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CLTCL1P53675 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC6.41□□□□□ -1.38
CLTCL1P53675 RPEP2-201ENST00000432149 701 ntBASIC6.41□□□□□ -1.38
CLTCL1P53675 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC6.41□□□□□ -1.38
CLTCL1P53675 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.41□□□□□ -1.38
CLTCL1P53675 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.41□□□□□ -1.38
CLTCL1P53675 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC6.41□□□□□ -1.38
CLTCL1P53675 AP003730.1-201ENST00000524605 285 ntBASIC6.41□□□□□ -1.38
CLTCL1P53675 ARL6IP1P1-201ENST00000545836 610 ntBASIC6.41□□□□□ -1.38
CLTCL1P53675 RPL7P50-201ENST00000600588 727 ntBASIC6.41□□□□□ -1.38
CLTCL1P53675 AC010201.1-201ENST00000605051 540 ntBASIC6.41□□□□□ -1.38
CLTCL1P53675 AC091979.2-201ENST00000607514 214 ntBASIC6.41□□□□□ -1.38
CLTCL1P53675 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC6.41□□□□□ -1.38
CLTCL1P53675 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CLTCL1P53675 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC6.41□□□□□ -1.38
CLTCL1P53675 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CLTCL1P53675 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CLTCL1P53675 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC6.41□□□□□ -1.38
CLTCL1P53675 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.41□□□□□ -1.38
CLTCL1P53675 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CLTCL1P53675 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CLTCL1P53675 SNORA74C-2-201ENST00000411179 201 ntBASIC6.4□□□□□ -1.38
CLTCL1P53675 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CLTCL1P53675 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC6.4□□□□□ -1.38
CLTCL1P53675 RPL34P6-201ENST00000432390 345 ntBASIC6.4□□□□□ -1.38
CLTCL1P53675 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.4□□□□□ -1.38
CLTCL1P53675 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC6.4□□□□□ -1.38
CLTCL1P53675 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC6.4□□□□□ -1.38
CLTCL1P53675 AC114495.1-201ENST00000441274 436 ntBASIC6.4□□□□□ -1.38
CLTCL1P53675 AL359073.1-201ENST00000448036 403 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms