Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.58□□□□□ -1.52
NUP98P52948 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NUP98P52948 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NUP98P52948 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
NUP98P52948 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NUP98P52948 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NUP98P52948 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.58□□□□□ -1.52
NUP98P52948 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NUP98P52948 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NUP98P52948 AL355852.1-201ENST00000454081 1771 ntBASIC5.58□□□□□ -1.52
NUP98P52948 AL161909.1-201ENST00000397390 712 ntBASIC5.58□□□□□ -1.52
NUP98P52948 ATP5F1P2-201ENST00000398143 760 ntBASIC5.58□□□□□ -1.52
NUP98P52948 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.58□□□□□ -1.52
NUP98P52948 AL158073.1-201ENST00000426848 1104 ntBASIC5.58□□□□□ -1.52
NUP98P52948 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NUP98P52948 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.58□□□□□ -1.52
NUP98P52948 AC239367.2-201ENST00000447309 705 ntBASIC5.58□□□□□ -1.52
NUP98P52948 RN7SL303P-201ENST00000469773 251 ntBASIC5.58□□□□□ -1.52
NUP98P52948 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
NUP98P52948 RNA5SP230-201ENST00000517039 122 ntBASIC5.58□□□□□ -1.52
NUP98P52948 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.58□□□□□ -1.52
NUP98P52948 BNIP3P5-201ENST00000562290 498 ntBASIC5.58□□□□□ -1.52
NUP98P52948 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.58□□□□□ -1.52
NUP98P52948 AC090506.2-201ENST00000624521 419 ntBASIC5.58□□□□□ -1.52
NUP98P52948 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.57□□□□□ -1.52
NUP98P52948 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
NUP98P52948 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NUP98P52948 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
NUP98P52948 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
NUP98P52948 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NUP98P52948 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NUP98P52948 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NUP98P52948 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
NUP98P52948 EI24P3-201ENST00000399046 1062 ntBASIC5.57□□□□□ -1.52
NUP98P52948 RN7SKP27-201ENST00000410684 333 ntBASIC5.57□□□□□ -1.52
NUP98P52948 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NUP98P52948 AL691449.1-201ENST00000426570 421 ntBASIC5.57□□□□□ -1.52
NUP98P52948 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NUP98P52948 AC114495.1-201ENST00000441274 436 ntBASIC5.57□□□□□ -1.52
NUP98P52948 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.57□□□□□ -1.52
NUP98P52948 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.57□□□□□ -1.52
NUP98P52948 RNA5SP73-201ENST00000516744 108 ntBASIC5.57□□□□□ -1.52
NUP98P52948 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.57□□□□□ -1.52
NUP98P52948 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.57□□□□□ -1.52
NUP98P52948 MIR4286-201ENST00000580651 93 ntBASIC5.57□□□□□ -1.52
NUP98P52948 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
NUP98P52948 AC007546.1-201ENST00000619452 559 ntBASIC5.57□□□□□ -1.52
NUP98P52948 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.57□□□□□ -1.52
NUP98P52948 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NUP98P52948 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.57□□□□□ -1.52
NUP98P52948 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NUP98P52948 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
NUP98P52948 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NUP98P52948 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
NUP98P52948 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NUP98P52948 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.56□□□□□ -1.52
NUP98P52948 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
NUP98P52948 ASNSP1-204ENST00000641977 1664 ntBASIC5.56□□□□□ -1.52
NUP98P52948 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.56□□□□□ -1.52
NUP98P52948 RN7SKP235-201ENST00000410662 305 ntBASIC5.56□□□□□ -1.52
NUP98P52948 RPS20P14-201ENST00000412545 360 ntBASIC5.56□□□□□ -1.52
NUP98P52948 RPL34P6-201ENST00000432390 345 ntBASIC5.56□□□□□ -1.52
NUP98P52948 TPT1P3-201ENST00000492841 512 ntBASIC5.56□□□□□ -1.52
NUP98P52948 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.56□□□□□ -1.52
NUP98P52948 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.56□□□□□ -1.52
NUP98P52948 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.56□□□□□ -1.52
NUP98P52948 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.56□□□□□ -1.52
NUP98P52948 AC023762.1-201ENST00000603280 584 ntBASIC5.56□□□□□ -1.52
NUP98P52948 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.56□□□□□ -1.52
NUP98P52948 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.56□□□□□ -1.52
NUP98P52948 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC5.56□□□□□ -1.52
NUP98P52948 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.56□□□□□ -1.52
NUP98P52948 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NUP98P52948 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.56□□□□□ -1.52
NUP98P52948 AC104118.1-201ENST00000607625 1589 ntBASIC5.56□□□□□ -1.52
NUP98P52948 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NUP98P52948 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.56□□□□□ -1.52
NUP98P52948 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NUP98P52948 AC104623.2-202ENST00000623477 4002 ntBASIC5.56□□□□□ -1.52
NUP98P52948 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
NUP98P52948 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NUP98P52948 AC011755.1-201ENST00000623763 2049 ntBASIC5.56□□□□□ -1.52
NUP98P52948 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
NUP98P52948 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.55□□□□□ -1.52
NUP98P52948 SNORA37-201ENST00000384504 129 ntBASIC5.55□□□□□ -1.52
NUP98P52948 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.55□□□□□ -1.52
NUP98P52948 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.55□□□□□ -1.52
NUP98P52948 AC004938.1-201ENST00000438468 308 ntBASIC5.55□□□□□ -1.52
NUP98P52948 HSFY6P-201ENST00000445573 403 ntBASIC5.55□□□□□ -1.52
NUP98P52948 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.55□□□□□ -1.52
NUP98P52948 AC108145.1-201ENST00000503770 153 ntBASIC5.55□□□□□ -1.52
NUP98P52948 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
NUP98P52948 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.55□□□□□ -1.52
NUP98P52948 AC005034.4-201ENST00000603612 899 ntBASIC5.55□□□□□ -1.52
NUP98P52948 AC090948.2-201ENST00000607363 564 ntBASIC5.55□□□□□ -1.52
NUP98P52948 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC5.55□□□□□ -1.52
NUP98P52948 AL672167.1-204ENST00000641875 3017 ntBASIC5.55□□□□□ -1.52
NUP98P52948 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
NUP98P52948 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.55□□□□□ -1.52
NUP98P52948 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms