Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.08□□□□□ -1.6
CLCNKAP51800 IMPA1P1-201ENST00000510718 842 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 MTCO3P27-201ENST00000514397 196 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLCNKAP51800 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.08□□□□□ -1.6
CLCNKAP51800 RN7SKP66-201ENST00000516681 231 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.08□□□□□ -1.6
CLCNKAP51800 AC092709.1-201ENST00000521355 1045 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 AC013701.1-201ENST00000522657 465 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 AL390334.1-201ENST00000556395 450 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.08□□□□□ -1.6
CLCNKAP51800 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.08□□□□□ -1.6
CLCNKAP51800 RN7SL290P-201ENST00000578661 300 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.08□□□□□ -1.6
CLCNKAP51800 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.08□□□□□ -1.6
CLCNKAP51800 MIR4443-201ENST00000585052 53 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 AL021707.7-201ENST00000607991 416 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CLCNKAP51800 AC068880.4-201ENST00000623082 495 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.08□□□□□ -1.6
CLCNKAP51800 AC090772.4-201ENST00000623599 362 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 AP002967.1-201ENST00000624203 539 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 AP001002.2-201ENST00000625137 386 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.08□□□□□ -1.6
CLCNKAP51800 FRG1DP-201ENST00000635586 771 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CLCNKAP51800 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.08□□□□□ -1.6
CLCNKAP51800 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLCNKAP51800 MUC2-202ENST00000613187 4845 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CLCNKAP51800 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLCNKAP51800 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.08□□□□□ -1.6
CLCNKAP51800 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLCNKAP51800 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLCNKAP51800 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLCNKAP51800 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CLCNKAP51800 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.08□□□□□ -1.6
CLCNKAP51800 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
CLCNKAP51800 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.08□□□□□ -1.6
CLCNKAP51800 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLCNKAP51800 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.08□□□□□ -1.6
CLCNKAP51800 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCNKAP51800 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLCNKAP51800 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCNKAP51800 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CLCNKAP51800 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCNKAP51800 MTCO1P4-201ENST00000520516 1409 ntBASIC5.07□□□□□ -1.6
CLCNKAP51800 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCNKAP51800 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCNKAP51800 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CLCNKAP51800 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CLCNKAP51800 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.07□□□□□ -1.6
CLCNKAP51800 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.07□□□□□ -1.6
CLCNKAP51800 AL450345.1-202ENST00000605741 3881 ntBASIC5.07□□□□□ -1.6
CLCNKAP51800 SNURFL-201ENST00000309296 343 ntBASIC5.07□□□□□ -1.6
CLCNKAP51800 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCNKAP51800 RN7SKP74-201ENST00000362849 309 ntBASIC5.07□□□□□ -1.6
CLCNKAP51800 SNORA74A-201ENST00000364089 198 ntBASIC5.07□□□□□ -1.6
CLCNKAP51800 RNU4-7P-201ENST00000364758 141 ntBASIC5.07□□□□□ -1.6
CLCNKAP51800 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCNKAP51800 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCNKAP51800 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCNKAP51800 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLCNKAP51800 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLCNKAP51800 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCNKAP51800 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.07□□□□□ -1.6
CLCNKAP51800 AL645931.1-201ENST00000439737 410 ntBASIC5.07□□□□□ -1.6
CLCNKAP51800 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.07□□□□□ -1.6
CLCNKAP51800 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLCNKAP51800 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLCNKAP51800 RPL7L1P1-201ENST00000448259 785 ntBASIC5.07□□□□□ -1.6
CLCNKAP51800 CBX1P2-201ENST00000453841 458 ntBASIC5.07□□□□□ -1.6
CLCNKAP51800 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.07□□□□□ -1.6
CLCNKAP51800 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.07□□□□□ -1.6
CLCNKAP51800 RN7SL97P-201ENST00000486780 299 ntBASIC5.07□□□□□ -1.6
CLCNKAP51800 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.07□□□□□ -1.6
CLCNKAP51800 AC021146.7-201ENST00000509604 775 ntBASIC5.07□□□□□ -1.6
CLCNKAP51800 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.07□□□□□ -1.6
CLCNKAP51800 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLCNKAP51800 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.07□□□□□ -1.6
CLCNKAP51800 AC109635.6-201ENST00000525487 1113 ntBASIC5.07□□□□□ -1.6
CLCNKAP51800 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.07□□□□□ -1.6
CLCNKAP51800 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.07□□□□□ -1.6
CLCNKAP51800 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.07□□□□□ -1.6
CLCNKAP51800 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.07□□□□□ -1.6
CLCNKAP51800 GLRXP2-201ENST00000555594 321 ntBASIC5.07□□□□□ -1.6
CLCNKAP51800 FAM106CP-201ENST00000582212 507 ntBASIC5.07□□□□□ -1.6
CLCNKAP51800 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.07□□□□□ -1.6
CLCNKAP51800 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.07□□□□□ -1.6
CLCNKAP51800 AL445222.1-201ENST00000607259 628 ntBASIC5.07□□□□□ -1.6
CLCNKAP51800 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.07□□□□□ -1.6
CLCNKAP51800 AC010608.3-201ENST00000625048 527 ntBASIC5.07□□□□□ -1.6
CLCNKAP51800 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
CLCNKAP51800 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.07□□□□□ -1.6
CLCNKAP51800 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCNKAP51800 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCNKAP51800 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCNKAP51800 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCNKAP51800 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLCNKAP51800 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms