Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXA1P49639 MT-RNR2-201ENST00000387347 1559 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXA1P49639 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXA1P49639 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXA1P49639 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HOXA1P49639 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXA1P49639 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HOXA1P49639 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
HOXA1P49639 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXA1P49639 AC006206.1-201ENST00000544842 3387 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HOXA1P49639 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXA1P49639 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HOXA1P49639 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HOXA1P49639 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
HOXA1P49639 CHMP1B2P-201ENST00000399581 597 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 AC092638.1-201ENST00000411966 1275 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 AL354890.1-201ENST00000413730 346 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXA1P49639 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXA1P49639 AC007738.1-201ENST00000413892 348 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 GTF2IP5-201ENST00000414608 731 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 MTCO3P4-201ENST00000419236 787 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 BX284632.2-201ENST00000421091 399 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.48□□□□□ -1.69
HOXA1P49639 AC092447.3-201ENST00000426027 686 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 AC092634.2-201ENST00000428146 1010 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HOXA1P49639 AC007679.3-201ENST00000434035 414 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 MTCYBP12-201ENST00000440559 1134 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 AL512605.1-202ENST00000441919 381 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 AL359955.2-201ENST00000445380 353 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXA1P49639 TRY2P-201ENST00000448860 689 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXA1P49639 FGF7P3-201ENST00000454645 303 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 HSPE1P22-201ENST00000456856 327 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 CST12P-201ENST00000457644 362 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 AC068228.1-201ENST00000461723 211 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 AC023194.2-201ENST00000465398 406 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXA1P49639 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXA1P49639 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXA1P49639 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXA1P49639 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXA1P49639 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXA1P49639 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXA1P49639 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXA1P49639 AC112673.1-201ENST00000513168 575 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXA1P49639 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXA1P49639 RNA5SP303-201ENST00000516192 130 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 SCARNA6.1-201ENST00000516989 238 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXA1P49639 AC092709.1-201ENST00000521355 1045 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXA1P49639 IGLV3-30-201ENST00000524362 298 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 MORF4L1P3-201ENST00000525966 950 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.48□□□□□ -1.69
HOXA1P49639 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXA1P49639 HMGN2P36-201ENST00000529541 409 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXA1P49639 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXA1P49639 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXA1P49639 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXA1P49639 AC026826.3-201ENST00000561747 158 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXA1P49639 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXA1P49639 RBM22P12-201ENST00000567098 1255 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXA1P49639 AC234772.3-201ENST00000602277 528 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 Z99289.3-201ENST00000605586 594 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 MIR7109-201ENST00000613748 65 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 AL356274.1-201ENST00000617064 410 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 AL591926.1-201ENST00000620542 217 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXA1P49639 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXA1P49639 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXA1P49639 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HOXA1P49639 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HOXA1P49639 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXA1P49639 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXA1P49639 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXA1P49639 NEPNP-201ENST00000404786 1371 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 MTND4P26-201ENST00000415971 1359 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 AC017007.4-201ENST00000503353 1352 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXA1P49639 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXA1P49639 AL133243.3-201ENST00000617415 3004 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXA1P49639 AL132640.2-201ENST00000559968 1698 ntBASIC4.48□□□□□ -1.69
HOXA1P49639 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXA1P49639 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXA1P49639 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA1P49639 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXA1P49639 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA1P49639 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.47□□□□□ -1.69
HOXA1P49639 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms