Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RNA5SP428-201ENST00000365129 132 ntBASIC4.26□□□□□ -1.73
CX3CR1P49238 AC093719.1-202ENST00000392735 373 ntBASIC4.26□□□□□ -1.73
CX3CR1P49238 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.26□□□□□ -1.73
CX3CR1P49238 AL034374.1-201ENST00000406329 351 ntBASIC4.26□□□□□ -1.73
CX3CR1P49238 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.26□□□□□ -1.73
CX3CR1P49238 RN7SKP247-201ENST00000411094 308 ntBASIC4.26□□□□□ -1.73
CX3CR1P49238 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.26□□□□□ -1.73
CX3CR1P49238 EIF4HP2-201ENST00000424380 563 ntBASIC4.26□□□□□ -1.73
CX3CR1P49238 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.26□□□□□ -1.73
CX3CR1P49238 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.26□□□□□ -1.73
CX3CR1P49238 AC092447.2-201ENST00000435487 669 ntBASIC4.26□□□□□ -1.73
CX3CR1P49238 CACYBPP1-201ENST00000438592 684 ntBASIC4.26□□□□□ -1.73
CX3CR1P49238 MTND6P18-201ENST00000439477 513 ntBASIC4.26□□□□□ -1.73
CX3CR1P49238 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.26□□□□□ -1.73
CX3CR1P49238 ARL4AP3-201ENST00000441452 574 ntBASIC4.26□□□□□ -1.73
CX3CR1P49238 AC000111.2-201ENST00000448200 210 ntBASIC4.26□□□□□ -1.73
CX3CR1P49238 AC016724.1-201ENST00000453215 421 ntBASIC4.26□□□□□ -1.73
CX3CR1P49238 RN7SL97P-201ENST00000486780 299 ntBASIC4.26□□□□□ -1.73
CX3CR1P49238 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.26□□□□□ -1.73
CX3CR1P49238 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.26□□□□□ -1.73
CX3CR1P49238 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.26□□□□□ -1.73
CX3CR1P49238 AC004980.4-201ENST00000513375 203 ntBASIC4.26□□□□□ -1.73
CX3CR1P49238 SEC11B-201ENST00000518383 499 ntBASIC4.26□□□□□ -1.73
CX3CR1P49238 IGHV3-63-201ENST00000518422 341 ntBASIC4.26□□□□□ -1.73
CX3CR1P49238 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.26□□□□□ -1.73
CX3CR1P49238 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CX3CR1P49238 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CX3CR1P49238 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.26□□□□□ -1.73
CX3CR1P49238 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.26□□□□□ -1.73
CX3CR1P49238 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.26□□□□□ -1.73
CX3CR1P49238 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.26□□□□□ -1.73
CX3CR1P49238 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.26□□□□□ -1.73
CX3CR1P49238 SUMO2P15-201ENST00000604285 278 ntBASIC4.26□□□□□ -1.73
CX3CR1P49238 AC093799.2-201ENST00000610062 578 ntBASIC4.26□□□□□ -1.73
CX3CR1P49238 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.26□□□□□ -1.73
CX3CR1P49238 AL353662.3-201ENST00000625131 237 ntBASIC4.26□□□□□ -1.73
CX3CR1P49238 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.26□□□□□ -1.73
CX3CR1P49238 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CX3CR1P49238 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
CX3CR1P49238 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CX3CR1P49238 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CX3CR1P49238 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CX3CR1P49238 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CX3CR1P49238 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CX3CR1P49238 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CX3CR1P49238 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.26□□□□□ -1.73
CX3CR1P49238 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CX3CR1P49238 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CX3CR1P49238 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
CX3CR1P49238 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CX3CR1P49238 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CX3CR1P49238 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CX3CR1P49238 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CX3CR1P49238 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CX3CR1P49238 AC008549.2-201ENST00000333482 706 ntBASIC4.25□□□□□ -1.73
CX3CR1P49238 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.25□□□□□ -1.73
CX3CR1P49238 RNU6-178P-201ENST00000384631 104 ntBASIC4.25□□□□□ -1.73
CX3CR1P49238 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CX3CR1P49238 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CX3CR1P49238 SNORA11.3-201ENST00000408471 128 ntBASIC4.25□□□□□ -1.73
CX3CR1P49238 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.25□□□□□ -1.73
CX3CR1P49238 RNU2-50P-201ENST00000410494 143 ntBASIC4.25□□□□□ -1.73
CX3CR1P49238 CASKP1-201ENST00000412870 582 ntBASIC4.25□□□□□ -1.73
CX3CR1P49238 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CX3CR1P49238 AL590806.1-201ENST00000415818 853 ntBASIC4.25□□□□□ -1.73
CX3CR1P49238 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.25□□□□□ -1.73
CX3CR1P49238 AL355433.1-201ENST00000422804 300 ntBASIC4.25□□□□□ -1.73
CX3CR1P49238 AC005033.1-201ENST00000428904 813 ntBASIC4.25□□□□□ -1.73
CX3CR1P49238 AL392003.1-201ENST00000434394 243 ntBASIC4.25□□□□□ -1.73
CX3CR1P49238 RPS26P2-201ENST00000440331 348 ntBASIC4.25□□□□□ -1.73
CX3CR1P49238 AL157884.3-201ENST00000448273 1184 ntBASIC4.25□□□□□ -1.73
CX3CR1P49238 HMGN1P8-201ENST00000463578 288 ntBASIC4.25□□□□□ -1.73
CX3CR1P49238 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.25□□□□□ -1.73
CX3CR1P49238 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CX3CR1P49238 HAUS1P1-201ENST00000505275 832 ntBASIC4.25□□□□□ -1.73
CX3CR1P49238 AC147055.1-201ENST00000509261 750 ntBASIC4.25□□□□□ -1.73
CX3CR1P49238 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.25□□□□□ -1.73
CX3CR1P49238 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.25□□□□□ -1.73
CX3CR1P49238 RN7SKP66-201ENST00000516681 231 ntBASIC4.25□□□□□ -1.73
CX3CR1P49238 RNU6-709P-201ENST00000517257 104 ntBASIC4.25□□□□□ -1.73
CX3CR1P49238 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.25□□□□□ -1.73
CX3CR1P49238 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.25□□□□□ -1.73
CX3CR1P49238 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.25□□□□□ -1.73
CX3CR1P49238 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.25□□□□□ -1.73
CX3CR1P49238 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CX3CR1P49238 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.25□□□□□ -1.73
CX3CR1P49238 AC087477.6-201ENST00000559595 843 ntBASIC4.25□□□□□ -1.73
CX3CR1P49238 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CX3CR1P49238 MIR3691-201ENST00000578066 90 ntBASIC4.25□□□□□ -1.73
CX3CR1P49238 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.25□□□□□ -1.73
CX3CR1P49238 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.25□□□□□ -1.73
CX3CR1P49238 MEMO1P5-201ENST00000604810 406 ntBASIC4.25□□□□□ -1.73
CX3CR1P49238 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.25□□□□□ -1.73
CX3CR1P49238 AC009163.6-201ENST00000612367 342 ntBASIC4.25□□□□□ -1.73
CX3CR1P49238 SNORA11.6-201ENST00000619030 128 ntBASIC4.25□□□□□ -1.73
CX3CR1P49238 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.25□□□□□ -1.73
CX3CR1P49238 AC092159.4-201ENST00000624944 550 ntBASIC4.25□□□□□ -1.73
CX3CR1P49238 BX005019.1-201ENST00000561881 1810 ntBASIC4.25□□□□□ -1.73
CX3CR1P49238 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CX3CR1P49238 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms