Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC002525.1-201ENST00000624392 1622 ntBASIC4.89□□□□□ -1.63
SOX2P48431 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SOX2P48431 NSRP1P1-201ENST00000444067 1693 ntBASIC4.89□□□□□ -1.63
SOX2P48431 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SOX2P48431 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SOX2P48431 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SOX2P48431 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SOX2P48431 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SOX2P48431 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SOX2P48431 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.89□□□□□ -1.63
SOX2P48431 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.89□□□□□ -1.63
SOX2P48431 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SOX2P48431 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SOX2P48431 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SOX2P48431 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SOX2P48431 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.88□□□□□ -1.63
SOX2P48431 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SOX2P48431 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SOX2P48431 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
SOX2P48431 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SOX2P48431 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SOX2P48431 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SOX2P48431 AL159987.1-201ENST00000347911 293 ntBASIC4.88□□□□□ -1.63
SOX2P48431 RNU1-146P-201ENST00000364015 165 ntBASIC4.88□□□□□ -1.63
SOX2P48431 MIR191-201ENST00000384873 92 ntBASIC4.88□□□□□ -1.63
SOX2P48431 PEX12P1-201ENST00000400284 1048 ntBASIC4.88□□□□□ -1.63
SOX2P48431 RNU2-18P-201ENST00000411224 162 ntBASIC4.88□□□□□ -1.63
SOX2P48431 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.88□□□□□ -1.63
SOX2P48431 OR5AW1P-201ENST00000426334 1006 ntBASIC4.88□□□□□ -1.63
SOX2P48431 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.88□□□□□ -1.63
SOX2P48431 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.88□□□□□ -1.63
SOX2P48431 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.88□□□□□ -1.63
SOX2P48431 AC234064.1-201ENST00000436312 247 ntBASIC4.88□□□□□ -1.63
SOX2P48431 AL117351.1-201ENST00000438864 766 ntBASIC4.88□□□□□ -1.63
SOX2P48431 FGF7P5-201ENST00000441829 291 ntBASIC4.88□□□□□ -1.63
SOX2P48431 AC007383.1-201ENST00000445875 636 ntBASIC4.88□□□□□ -1.63
SOX2P48431 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.88□□□□□ -1.63
SOX2P48431 AL929288.2-201ENST00000446368 407 ntBASIC4.88□□□□□ -1.63
SOX2P48431 AL133217.1-201ENST00000450980 425 ntBASIC4.88□□□□□ -1.63
SOX2P48431 AC234781.3-201ENST00000452540 973 ntBASIC4.88□□□□□ -1.63
SOX2P48431 CBX1P2-201ENST00000453841 458 ntBASIC4.88□□□□□ -1.63
SOX2P48431 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.88□□□□□ -1.63
SOX2P48431 RN7SL188P-201ENST00000469842 285 ntBASIC4.88□□□□□ -1.63
SOX2P48431 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.88□□□□□ -1.63
SOX2P48431 UBFD1P1-201ENST00000473259 814 ntBASIC4.88□□□□□ -1.63
SOX2P48431 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.88□□□□□ -1.63
SOX2P48431 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SOX2P48431 RN7SL570P-201ENST00000484405 292 ntBASIC4.88□□□□□ -1.63
SOX2P48431 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.88□□□□□ -1.63
SOX2P48431 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.88□□□□□ -1.63
SOX2P48431 DUTP7-201ENST00000507982 486 ntBASIC4.88□□□□□ -1.63
SOX2P48431 AC118282.2-201ENST00000508739 374 ntBASIC4.88□□□□□ -1.63
SOX2P48431 MRPS33P3-201ENST00000513456 322 ntBASIC4.88□□□□□ -1.63
SOX2P48431 FABP5P12-201ENST00000515543 389 ntBASIC4.88□□□□□ -1.63
SOX2P48431 SCARNA6.1-201ENST00000516989 238 ntBASIC4.88□□□□□ -1.63
SOX2P48431 SEPT10P1-201ENST00000517342 1162 ntBASIC4.88□□□□□ -1.63
SOX2P48431 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.88□□□□□ -1.63
SOX2P48431 IGKV3D-25-201ENST00000519599 235 ntBASIC4.88□□□□□ -1.63
SOX2P48431 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.88□□□□□ -1.63
SOX2P48431 AP003461.1-201ENST00000528866 78 ntBASIC4.88□□□□□ -1.63
SOX2P48431 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.88□□□□□ -1.63
SOX2P48431 YWHABP2-201ENST00000540201 713 ntBASIC4.88□□□□□ -1.63
SOX2P48431 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.88□□□□□ -1.63
SOX2P48431 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.88□□□□□ -1.63
SOX2P48431 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.88□□□□□ -1.63
SOX2P48431 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.88□□□□□ -1.63
SOX2P48431 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.88□□□□□ -1.63
SOX2P48431 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.88□□□□□ -1.63
SOX2P48431 AC019322.1-201ENST00000571869 389 ntBASIC4.88□□□□□ -1.63
SOX2P48431 APOC2-205ENST00000592257 444 ntTSL 3 BASIC4.88□□□□□ -1.63
SOX2P48431 AC015726.1-201ENST00000602353 681 ntBASIC4.88□□□□□ -1.63
SOX2P48431 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC4.88□□□□□ -1.63
SOX2P48431 AC090525.3-201ENST00000605601 189 ntBASIC4.88□□□□□ -1.63
SOX2P48431 VIS1.1-201ENST00000610517 203 ntBASIC4.88□□□□□ -1.63
SOX2P48431 AC092266.1-201ENST00000610958 165 ntBASIC4.88□□□□□ -1.63
SOX2P48431 AC009090.3-201ENST00000616553 565 ntBASIC4.88□□□□□ -1.63
SOX2P48431 AC021106.3-201ENST00000623925 531 ntBASIC4.88□□□□□ -1.63
SOX2P48431 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC4.88□□□□□ -1.63
SOX2P48431 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
SOX2P48431 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SOX2P48431 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.88□□□□□ -1.63
SOX2P48431 OR8B1P-202ENST00000641132 1178 ntBASIC4.88□□□□□ -1.63
SOX2P48431 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SOX2P48431 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.88□□□□□ -1.63
SOX2P48431 AC007996.1-201ENST00000620414 2821 ntBASIC4.88□□□□□ -1.63
SOX2P48431 DDX18P5-201ENST00000534547 1306 ntBASIC4.88□□□□□ -1.63
SOX2P48431 MTCO1P6-201ENST00000481192 1384 ntBASIC4.88□□□□□ -1.63
SOX2P48431 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SOX2P48431 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SOX2P48431 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SOX2P48431 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SOX2P48431 AL450345.1-202ENST00000605741 3881 ntBASIC4.88□□□□□ -1.63
SOX2P48431 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SOX2P48431 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SOX2P48431 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
SOX2P48431 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.87□□□□□ -1.63
SOX2P48431 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC4.87□□□□□ -1.63
SOX2P48431 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.87□□□□□ -1.63
SOX2P48431 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SOX2P48431 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms