Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA13P31271 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA13P31271 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA13P31271 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXA13P31271 RNU2-22P-201ENST00000411266 212 ntBASIC5.52□□□□□ -1.53
HOXA13P31271 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXA13P31271 AL645608.4-201ENST00000423619 154 ntBASIC5.52□□□□□ -1.53
HOXA13P31271 RPL17P35-201ENST00000432217 549 ntBASIC5.52□□□□□ -1.53
HOXA13P31271 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXA13P31271 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXA13P31271 AC245517.2-201ENST00000442890 346 ntBASIC5.52□□□□□ -1.53
HOXA13P31271 AC073264.2-201ENST00000448886 166 ntBASIC5.52□□□□□ -1.53
HOXA13P31271 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXA13P31271 RN7SL738P-201ENST00000470264 297 ntBASIC5.52□□□□□ -1.53
HOXA13P31271 RPL12P20-201ENST00000475538 479 ntBASIC5.52□□□□□ -1.53
HOXA13P31271 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXA13P31271 LARP7P4-201ENST00000481075 878 ntBASIC5.52□□□□□ -1.53
HOXA13P31271 RWDD4P1-201ENST00000488019 565 ntBASIC5.52□□□□□ -1.53
HOXA13P31271 RN7SL205P-201ENST00000490174 284 ntBASIC5.52□□□□□ -1.53
HOXA13P31271 AC011005.3-201ENST00000491624 395 ntBASIC5.52□□□□□ -1.53
HOXA13P31271 RPL23AP72-201ENST00000492447 435 ntBASIC5.52□□□□□ -1.53
HOXA13P31271 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.52□□□□□ -1.53
HOXA13P31271 MTCO1P31-201ENST00000506355 492 ntBASIC5.52□□□□□ -1.53
HOXA13P31271 ASNSP4-201ENST00000511103 447 ntBASIC5.52□□□□□ -1.53
HOXA13P31271 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.52□□□□□ -1.53
HOXA13P31271 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXA13P31271 AP006289.1-201ENST00000538089 277 ntBASIC5.52□□□□□ -1.53
HOXA13P31271 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.52□□□□□ -1.53
HOXA13P31271 AC079075.1-201ENST00000559543 878 ntBASIC5.52□□□□□ -1.53
HOXA13P31271 AGGF1P9-201ENST00000561884 913 ntBASIC5.52□□□□□ -1.53
HOXA13P31271 AC093249.4-201ENST00000564755 259 ntBASIC5.52□□□□□ -1.53
HOXA13P31271 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXA13P31271 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.52□□□□□ -1.53
HOXA13P31271 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXA13P31271 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.52□□□□□ -1.53
HOXA13P31271 RN7SL52P-201ENST00000584271 284 ntBASIC5.52□□□□□ -1.53
HOXA13P31271 LSM1P2-201ENST00000604911 322 ntBASIC5.52□□□□□ -1.53
HOXA13P31271 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA13P31271 RN7SL722P-201ENST00000617780 284 ntBASIC5.52□□□□□ -1.53
HOXA13P31271 RN7SL565P-201ENST00000618246 284 ntBASIC5.52□□□□□ -1.53
HOXA13P31271 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXA13P31271 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXA13P31271 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA13P31271 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA13P31271 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA13P31271 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXA13P31271 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
HOXA13P31271 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
HOXA13P31271 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXA13P31271 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.51□□□□□ -1.53
HOXA13P31271 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXA13P31271 AL590240.1-201ENST00000334118 313 ntBASIC5.51□□□□□ -1.53
HOXA13P31271 SNORD115-48-201ENST00000364764 76 ntBASIC5.51□□□□□ -1.53
HOXA13P31271 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.51□□□□□ -1.53
HOXA13P31271 RNU6-398P-201ENST00000384143 109 ntBASIC5.51□□□□□ -1.53
HOXA13P31271 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.51□□□□□ -1.53
HOXA13P31271 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.51□□□□□ -1.53
HOXA13P31271 AL356981.1-201ENST00000454879 684 ntBASIC5.51□□□□□ -1.53
HOXA13P31271 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.51□□□□□ -1.53
HOXA13P31271 AC006967.1-201ENST00000467608 589 ntBASIC5.51□□□□□ -1.53
HOXA13P31271 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
HOXA13P31271 RN7SL558P-201ENST00000497468 299 ntBASIC5.51□□□□□ -1.53
HOXA13P31271 HMGB1P3-201ENST00000502802 616 ntBASIC5.51□□□□□ -1.53
HOXA13P31271 SCARNA22-201ENST00000503991 125 ntBASIC5.51□□□□□ -1.53
HOXA13P31271 AC091868.1-201ENST00000508746 304 ntBASIC5.51□□□□□ -1.53
HOXA13P31271 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.51□□□□□ -1.53
HOXA13P31271 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.51□□□□□ -1.53
HOXA13P31271 AC006349.1-201ENST00000555526 235 ntBASIC5.51□□□□□ -1.53
HOXA13P31271 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.51□□□□□ -1.53
HOXA13P31271 AC098935.2-201ENST00000604222 466 ntBASIC5.51□□□□□ -1.53
HOXA13P31271 AL121932.1-201ENST00000605542 214 ntBASIC5.51□□□□□ -1.53
HOXA13P31271 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.51□□□□□ -1.53
HOXA13P31271 AC005021.1-201ENST00000608730 355 ntBASIC5.51□□□□□ -1.53
HOXA13P31271 AC004241.3-201ENST00000611728 517 ntBASIC5.51□□□□□ -1.53
HOXA13P31271 CR589904.2-201ENST00000612533 440 ntBASIC5.51□□□□□ -1.53
HOXA13P31271 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.51□□□□□ -1.53
HOXA13P31271 AP000720.1-201ENST00000625091 483 ntBASIC5.51□□□□□ -1.53
HOXA13P31271 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.51□□□□□ -1.53
HOXA13P31271 MFSD8-216ENST00000641147 4009 ntBASIC5.51□□□□□ -1.53
HOXA13P31271 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXA13P31271 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HOXA13P31271 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXA13P31271 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HOXA13P31271 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXA13P31271 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HOXA13P31271 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HOXA13P31271 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
HOXA13P31271 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HOXA13P31271 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXA13P31271 Y_RNA.110-201ENST00000363220 99 ntBASIC5.5□□□□□ -1.53
HOXA13P31271 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXA13P31271 MIR192-201ENST00000384915 110 ntBASIC5.5□□□□□ -1.53
HOXA13P31271 RNU2-50P-201ENST00000410494 143 ntBASIC5.5□□□□□ -1.53
HOXA13P31271 FABP7P1-201ENST00000424004 391 ntBASIC5.5□□□□□ -1.53
HOXA13P31271 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXA13P31271 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXA13P31271 RPS26P4-201ENST00000431743 355 ntBASIC5.5□□□□□ -1.53
HOXA13P31271 RPS17P8-201ENST00000434525 335 ntBASIC5.5□□□□□ -1.53
HOXA13P31271 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.5□□□□□ -1.53
HOXA13P31271 AC011753.3-201ENST00000443436 406 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms