Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.06□□□□□ -1.6
ABCD3P28288 MORF4L1P3-201ENST00000525966 950 ntBASIC5.06□□□□□ -1.6
ABCD3P28288 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.06□□□□□ -1.6
ABCD3P28288 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.06□□□□□ -1.6
ABCD3P28288 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.06□□□□□ -1.6
ABCD3P28288 AC018552.3-201ENST00000567416 561 ntBASIC5.06□□□□□ -1.6
ABCD3P28288 AC023824.3-201ENST00000569003 562 ntBASIC5.06□□□□□ -1.6
ABCD3P28288 AP005403.1-201ENST00000579720 229 ntBASIC5.06□□□□□ -1.6
ABCD3P28288 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.06□□□□□ -1.6
ABCD3P28288 VN1R88P-201ENST00000596787 292 ntBASIC5.06□□□□□ -1.6
ABCD3P28288 AC023762.1-201ENST00000603280 584 ntBASIC5.06□□□□□ -1.6
ABCD3P28288 AC009027.1-201ENST00000604510 479 ntBASIC5.06□□□□□ -1.6
ABCD3P28288 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.06□□□□□ -1.6
ABCD3P28288 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.06□□□□□ -1.6
ABCD3P28288 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.06□□□□□ -1.6
ABCD3P28288 MIR6768-201ENST00000610734 72 ntBASIC5.06□□□□□ -1.6
ABCD3P28288 MIR6862-1-201ENST00000613016 70 ntBASIC5.06□□□□□ -1.6
ABCD3P28288 MIR6862-2-201ENST00000614755 70 ntBASIC5.06□□□□□ -1.6
ABCD3P28288 AC123768.4-201ENST00000616244 701 ntBASIC5.06□□□□□ -1.6
ABCD3P28288 MIR8080-201ENST00000622224 89 ntBASIC5.06□□□□□ -1.6
ABCD3P28288 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.06□□□□□ -1.6
ABCD3P28288 AL355480.1-201ENST00000629041 99 ntBASIC5.06□□□□□ -1.6
ABCD3P28288 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.06□□□□□ -1.6
ABCD3P28288 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.06□□□□□ -1.6
ABCD3P28288 AL590396.4-201ENST00000636779 956 ntBASIC5.06□□□□□ -1.6
ABCD3P28288 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.06□□□□□ -1.6
ABCD3P28288 OR2L1P-202ENST00000641567 1023 ntBASIC5.06□□□□□ -1.6
ABCD3P28288 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
ABCD3P28288 AC139713.2-210ENST00000641741 992 ntBASIC5.06□□□□□ -1.6
ABCD3P28288 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
ABCD3P28288 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
ABCD3P28288 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ABCD3P28288 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.06□□□□□ -1.6
ABCD3P28288 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.06□□□□□ -1.6
ABCD3P28288 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.06□□□□□ -1.6
ABCD3P28288 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ABCD3P28288 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
ABCD3P28288 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ABCD3P28288 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
ABCD3P28288 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
ABCD3P28288 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ABCD3P28288 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.05□□□□□ -1.6
ABCD3P28288 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
ABCD3P28288 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
ABCD3P28288 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.05□□□□□ -1.6
ABCD3P28288 AC092681.1-201ENST00000297369 291 ntBASIC5.05□□□□□ -1.6
ABCD3P28288 RNU5E-10P-201ENST00000363506 118 ntBASIC5.05□□□□□ -1.6
ABCD3P28288 RNU2-6P-201ENST00000411404 190 ntBASIC5.05□□□□□ -1.6
ABCD3P28288 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.05□□□□□ -1.6
ABCD3P28288 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.05□□□□□ -1.6
ABCD3P28288 NPM1P18-201ENST00000434232 732 ntBASIC5.05□□□□□ -1.6
ABCD3P28288 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.05□□□□□ -1.6
ABCD3P28288 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.05□□□□□ -1.6
ABCD3P28288 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.05□□□□□ -1.6
ABCD3P28288 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
ABCD3P28288 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.05□□□□□ -1.6
ABCD3P28288 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.05□□□□□ -1.6
ABCD3P28288 RPL23AP37-201ENST00000479658 549 ntBASIC5.05□□□□□ -1.6
ABCD3P28288 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.05□□□□□ -1.6
ABCD3P28288 RN7SL184P-201ENST00000488308 297 ntBASIC5.05□□□□□ -1.6
ABCD3P28288 RN7SL547P-201ENST00000490793 290 ntBASIC5.05□□□□□ -1.6
ABCD3P28288 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.05□□□□□ -1.6
ABCD3P28288 MTND6P2-201ENST00000512226 524 ntBASIC5.05□□□□□ -1.6
ABCD3P28288 AC119751.1-201ENST00000513357 765 ntBASIC5.05□□□□□ -1.6
ABCD3P28288 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.05□□□□□ -1.6
ABCD3P28288 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.05□□□□□ -1.6
ABCD3P28288 MTND1P6-201ENST00000523621 946 ntBASIC5.05□□□□□ -1.6
ABCD3P28288 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.05□□□□□ -1.6
ABCD3P28288 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.05□□□□□ -1.6
ABCD3P28288 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.05□□□□□ -1.6
ABCD3P28288 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.05□□□□□ -1.6
ABCD3P28288 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.05□□□□□ -1.6
ABCD3P28288 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.05□□□□□ -1.6
ABCD3P28288 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.05□□□□□ -1.6
ABCD3P28288 AL606834.3-201ENST00000602615 496 ntBASIC5.05□□□□□ -1.6
ABCD3P28288 AL391001.1-201ENST00000602747 715 ntBASIC5.05□□□□□ -1.6
ABCD3P28288 AC079395.2-201ENST00000610982 737 ntBASIC5.05□□□□□ -1.6
ABCD3P28288 AC100847.1-201ENST00000611316 481 ntBASIC5.05□□□□□ -1.6
ABCD3P28288 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.05□□□□□ -1.6
ABCD3P28288 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ABCD3P28288 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ABCD3P28288 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.05□□□□□ -1.6
ABCD3P28288 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ABCD3P28288 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ABCD3P28288 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.05□□□□□ -1.6
ABCD3P28288 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
ABCD3P28288 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
ABCD3P28288 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ABCD3P28288 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ABCD3P28288 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.04□□□□□ -1.6
ABCD3P28288 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.04□□□□□ -1.6
ABCD3P28288 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ABCD3P28288 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ABCD3P28288 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.04□□□□□ -1.6
ABCD3P28288 RN7SKP185-201ENST00000362813 326 ntBASIC5.04□□□□□ -1.6
ABCD3P28288 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.04□□□□□ -1.6
ABCD3P28288 SNORA51.12-201ENST00000384448 134 ntBASIC5.04□□□□□ -1.6
ABCD3P28288 SNORD56.6-201ENST00000384569 71 ntBASIC5.04□□□□□ -1.6
ABCD3P28288 U3.28-201ENST00000391249 210 ntBASIC5.04□□□□□ -1.6
ABCD3P28288 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms