Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.42□□□□□ -1.54
NR4A1P22736 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.42□□□□□ -1.54
NR4A1P22736 BCAS2P1-201ENST00000528022 632 ntBASIC5.42□□□□□ -1.54
NR4A1P22736 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.42□□□□□ -1.54
NR4A1P22736 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NR4A1P22736 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.42□□□□□ -1.54
NR4A1P22736 PCNPP1-201ENST00000552501 511 ntBASIC5.42□□□□□ -1.54
NR4A1P22736 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.42□□□□□ -1.54
NR4A1P22736 ZNF322P1-201ENST00000568013 1209 ntBASIC5.42□□□□□ -1.54
NR4A1P22736 MIR4999-201ENST00000585029 91 ntBASIC5.42□□□□□ -1.54
NR4A1P22736 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.42□□□□□ -1.54
NR4A1P22736 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.42□□□□□ -1.54
NR4A1P22736 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.42□□□□□ -1.54
NR4A1P22736 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.42□□□□□ -1.54
NR4A1P22736 AC079089.3-201ENST00000603094 673 ntBASIC5.42□□□□□ -1.54
NR4A1P22736 AC096553.1-201ENST00000605169 829 ntBASIC5.42□□□□□ -1.54
NR4A1P22736 AC087241.4-201ENST00000612441 480 ntBASIC5.42□□□□□ -1.54
NR4A1P22736 AC025588.4-201ENST00000615802 908 ntBASIC5.42□□□□□ -1.54
NR4A1P22736 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
NR4A1P22736 AC009878.1-201ENST00000621819 340 ntBASIC5.42□□□□□ -1.54
NR4A1P22736 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.42□□□□□ -1.54
NR4A1P22736 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.42□□□□□ -1.54
NR4A1P22736 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.42□□□□□ -1.54
NR4A1P22736 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.42□□□□□ -1.54
NR4A1P22736 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NR4A1P22736 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.42□□□□□ -1.54
NR4A1P22736 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NR4A1P22736 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NR4A1P22736 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.42□□□□□ -1.54
NR4A1P22736 AC017007.4-201ENST00000503353 1352 ntBASIC5.42□□□□□ -1.54
NR4A1P22736 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NR4A1P22736 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NR4A1P22736 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.41□□□□□ -1.54
NR4A1P22736 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
NR4A1P22736 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
NR4A1P22736 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
NR4A1P22736 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NR4A1P22736 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NR4A1P22736 RN7SKP185-201ENST00000362813 326 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 RN7SKP145-201ENST00000363291 303 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 RNA5SP346-201ENST00000363541 121 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.41□□□□□ -1.54
NR4A1P22736 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.41□□□□□ -1.54
NR4A1P22736 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.41□□□□□ -1.54
NR4A1P22736 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.41□□□□□ -1.54
NR4A1P22736 Y_RNA.517-201ENST00000384551 106 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 RN7SKP144-201ENST00000411108 279 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.41□□□□□ -1.54
NR4A1P22736 AC245096.1-201ENST00000413104 546 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.41□□□□□ -1.54
NR4A1P22736 MTND1P23-201ENST00000416931 372 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.41□□□□□ -1.54
NR4A1P22736 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.41□□□□□ -1.54
NR4A1P22736 AL121878.1-201ENST00000418638 859 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 AC023128.2-201ENST00000420880 1223 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.41□□□□□ -1.54
NR4A1P22736 AL049610.1-201ENST00000423374 372 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.41□□□□□ -1.54
NR4A1P22736 RPS7P14-201ENST00000426405 583 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 NPM1P18-201ENST00000434232 732 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NR4A1P22736 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.41□□□□□ -1.54
NR4A1P22736 AC010240.2-201ENST00000445363 1205 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 AL157827.1-201ENST00000447622 132 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 HIGD1AP16-201ENST00000450986 258 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.41□□□□□ -1.54
NR4A1P22736 CTSLP6-201ENST00000458273 1002 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 RPS7P7-201ENST00000463499 571 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.41□□□□□ -1.54
NR4A1P22736 AC068724.1-201ENST00000487100 792 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 SNX18P24-201ENST00000505249 671 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.41□□□□□ -1.54
NR4A1P22736 MAST4-IT1-201ENST00000514241 658 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 CR383658.1-201ENST00000514609 734 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 HSD3BP3-201ENST00000514706 994 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.41□□□□□ -1.54
NR4A1P22736 SNORA31.13-201ENST00000516624 135 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.41□□□□□ -1.54
NR4A1P22736 MTND4LP26-201ENST00000518144 282 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NR4A1P22736 NDUFA5P2-201ENST00000519723 344 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC5.41□□□□□ -1.54
NR4A1P22736 AC078899.1-201ENST00000521432 1185 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.41□□□□□ -1.54
NR4A1P22736 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.41□□□□□ -1.54
NR4A1P22736 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NR4A1P22736 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC5.41□□□□□ -1.54
NR4A1P22736 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.41□□□□□ -1.54
NR4A1P22736 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.41□□□□□ -1.54
NR4A1P22736 AC126615.2-201ENST00000553003 515 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC5.41□□□□□ -1.54
NR4A1P22736 OR11H3P-201ENST00000554547 982 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 AL845552.1-201ENST00000556820 323 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.41□□□□□ -1.54
NR4A1P22736 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.41□□□□□ -1.54
NR4A1P22736 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.41□□□□□ -1.54
NR4A1P22736 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.41□□□□□ -1.54
NR4A1P22736 AC026826.3-201ENST00000561747 158 ntBASIC5.41□□□□□ -1.54
NR4A1P22736 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.41□□□□□ -1.54
NR4A1P22736 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms