Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
LIG1P18858 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LIG1P18858 RNU1-65P-201ENST00000363919 148 ntBASIC7□□□□□ -1.29
LIG1P18858 RPL7P8-201ENST00000411964 730 ntBASIC7□□□□□ -1.29
LIG1P18858 RPS27AP7-201ENST00000422792 455 ntBASIC7□□□□□ -1.29
LIG1P18858 RPS3AP38-201ENST00000435889 763 ntBASIC7□□□□□ -1.29
LIG1P18858 VN1R34P-201ENST00000447387 883 ntBASIC7□□□□□ -1.29
LIG1P18858 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7□□□□□ -1.29
LIG1P18858 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC7□□□□□ -1.29
LIG1P18858 RN7SL168P-201ENST00000463821 279 ntBASIC7□□□□□ -1.29
LIG1P18858 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC7□□□□□ -1.29
LIG1P18858 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC7□□□□□ -1.29
LIG1P18858 GTF2F2P1-201ENST00000511083 675 ntBASIC7□□□□□ -1.29
LIG1P18858 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7□□□□□ -1.29
LIG1P18858 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7□□□□□ -1.29
LIG1P18858 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC7□□□□□ -1.29
LIG1P18858 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC7□□□□□ -1.29
LIG1P18858 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC7□□□□□ -1.29
LIG1P18858 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7□□□□□ -1.29
LIG1P18858 AL121839.1-201ENST00000556233 1185 ntBASIC7□□□□□ -1.29
LIG1P18858 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC7□□□□□ -1.29
LIG1P18858 AL078601.3-201ENST00000573303 535 ntBASIC7□□□□□ -1.29
LIG1P18858 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC7□□□□□ -1.29
LIG1P18858 DYNLL1P1-201ENST00000595442 269 ntBASIC7□□□□□ -1.29
LIG1P18858 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7□□□□□ -1.29
LIG1P18858 AC018714.1-201ENST00000605028 208 ntBASIC7□□□□□ -1.29
LIG1P18858 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC7□□□□□ -1.29
LIG1P18858 AC068870.3-201ENST00000625077 2536 ntBASIC7□□□□□ -1.29
LIG1P18858 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC7□□□□□ -1.29
LIG1P18858 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LIG1P18858 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LIG1P18858 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC7□□□□□ -1.29
LIG1P18858 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LIG1P18858 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LIG1P18858 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.99□□□□□ -1.29
LIG1P18858 AL355834.1-201ENST00000556602 3965 ntBASIC6.99□□□□□ -1.29
LIG1P18858 AL359091.1-201ENST00000449048 1734 ntBASIC6.99□□□□□ -1.29
LIG1P18858 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LIG1P18858 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.99□□□□□ -1.29
LIG1P18858 MTND4P29-201ENST00000503122 1372 ntBASIC6.99□□□□□ -1.29
LIG1P18858 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
LIG1P18858 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
LIG1P18858 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.99□□□□□ -1.29
LIG1P18858 AP002512.4-202ENST00000641599 4530 ntBASIC6.99□□□□□ -1.29
LIG1P18858 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
LIG1P18858 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
LIG1P18858 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.99□□□□□ -1.29
LIG1P18858 RNU1-49P-201ENST00000363468 159 ntBASIC6.99□□□□□ -1.29
LIG1P18858 RNA5SP27-201ENST00000363839 119 ntBASIC6.99□□□□□ -1.29
LIG1P18858 MIR188-201ENST00000385034 86 ntBASIC6.99□□□□□ -1.29
LIG1P18858 RNU11-201ENST00000387069 134 ntBASIC6.99□□□□□ -1.29
LIG1P18858 YWHAZP6-201ENST00000399764 738 ntBASIC6.99□□□□□ -1.29
LIG1P18858 AL022400.1-201ENST00000423946 935 ntBASIC6.99□□□□□ -1.29
LIG1P18858 AL590399.2-201ENST00000427536 309 ntBASIC6.99□□□□□ -1.29
LIG1P18858 CNOT7P1-201ENST00000429006 852 ntBASIC6.99□□□□□ -1.29
LIG1P18858 AC108479.1-201ENST00000431142 427 ntBASIC6.99□□□□□ -1.29
LIG1P18858 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.99□□□□□ -1.29
LIG1P18858 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
LIG1P18858 CNOT7P2-201ENST00000441051 832 ntBASIC6.99□□□□□ -1.29
LIG1P18858 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.99□□□□□ -1.29
LIG1P18858 USP9YP29-201ENST00000445112 563 ntBASIC6.99□□□□□ -1.29
LIG1P18858 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
LIG1P18858 AL157827.1-201ENST00000447622 132 ntBASIC6.99□□□□□ -1.29
LIG1P18858 RHEBP2-201ENST00000450289 600 ntBASIC6.99□□□□□ -1.29
LIG1P18858 RBMY2TP-201ENST00000451162 947 ntBASIC6.99□□□□□ -1.29
LIG1P18858 CDC42P1-201ENST00000456658 548 ntBASIC6.99□□□□□ -1.29
LIG1P18858 RPL7P18-201ENST00000478965 734 ntBASIC6.99□□□□□ -1.29
LIG1P18858 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.99□□□□□ -1.29
LIG1P18858 MTND2P33-201ENST00000506452 1031 ntBASIC6.99□□□□□ -1.29
LIG1P18858 ZNF519P4-201ENST00000514008 125 ntBASIC6.99□□□□□ -1.29
LIG1P18858 TPM3P3-201ENST00000521343 354 ntBASIC6.99□□□□□ -1.29
LIG1P18858 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.99□□□□□ -1.29
LIG1P18858 DUX4L52-201ENST00000549363 777 ntBASIC6.99□□□□□ -1.29
LIG1P18858 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.99□□□□□ -1.29
LIG1P18858 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC6.99□□□□□ -1.29
LIG1P18858 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.99□□□□□ -1.29
LIG1P18858 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LIG1P18858 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.99□□□□□ -1.29
LIG1P18858 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC6.99□□□□□ -1.29
LIG1P18858 AC012414.6-201ENST00000568241 401 ntBASIC6.99□□□□□ -1.29
LIG1P18858 AC012435.1-202ENST00000568772 240 ntBASIC6.99□□□□□ -1.29
LIG1P18858 OR1E3-201ENST00000575608 948 ntBASIC6.99□□□□□ -1.29
LIG1P18858 MIR3912-201ENST00000577566 105 ntBASIC6.99□□□□□ -1.29
LIG1P18858 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.99□□□□□ -1.29
LIG1P18858 MTND1P15-201ENST00000579262 949 ntBASIC6.99□□□□□ -1.29
LIG1P18858 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.99□□□□□ -1.29
LIG1P18858 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC6.99□□□□□ -1.29
LIG1P18858 BNIP3P26-201ENST00000600827 554 ntBASIC6.99□□□□□ -1.29
LIG1P18858 AC068790.7-201ENST00000602347 528 ntBASIC6.99□□□□□ -1.29
LIG1P18858 AP001267.4-201ENST00000602598 545 ntBASIC6.99□□□□□ -1.29
LIG1P18858 AL360012.1-201ENST00000602813 131 ntBASIC6.99□□□□□ -1.29
LIG1P18858 AC018618.2-201ENST00000604770 446 ntBASIC6.99□□□□□ -1.29
LIG1P18858 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.99□□□□□ -1.29
LIG1P18858 AL359091.2-201ENST00000609303 556 ntBASIC6.99□□□□□ -1.29
LIG1P18858 AC008083.4-201ENST00000615076 444 ntBASIC6.99□□□□□ -1.29
LIG1P18858 FRG1HP-204ENST00000617940 757 ntBASIC6.99□□□□□ -1.29
LIG1P18858 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
LIG1P18858 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LIG1P18858 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC6.99□□□□□ -1.29
LIG1P18858 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms