Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 NPM1P33-201ENST00000438918 872 ntBASIC4.71□□□□□ -1.66
HMGA1P17096 AL161722.1-201ENST00000446972 1032 ntBASIC4.71□□□□□ -1.66
HMGA1P17096 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.71□□□□□ -1.66
HMGA1P17096 RPL7AP52-201ENST00000458096 790 ntBASIC4.71□□□□□ -1.66
HMGA1P17096 RN7SL98P-201ENST00000462271 300 ntBASIC4.71□□□□□ -1.66
HMGA1P17096 FTH1P2-201ENST00000466086 412 ntBASIC4.71□□□□□ -1.66
HMGA1P17096 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HMGA1P17096 AC068587.1-201ENST00000483613 781 ntBASIC4.71□□□□□ -1.66
HMGA1P17096 AC069304.1-201ENST00000491593 704 ntBASIC4.71□□□□□ -1.66
HMGA1P17096 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMGA1P17096 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.71□□□□□ -1.66
HMGA1P17096 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.71□□□□□ -1.66
HMGA1P17096 MIR3939-201ENST00000582614 106 ntBASIC4.71□□□□□ -1.66
HMGA1P17096 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.71□□□□□ -1.66
HMGA1P17096 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMGA1P17096 AC068831.8-201ENST00000620171 435 ntBASIC4.71□□□□□ -1.66
HMGA1P17096 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMGA1P17096 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMGA1P17096 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.71□□□□□ -1.66
HMGA1P17096 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC4.71□□□□□ -1.66
HMGA1P17096 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC4.71□□□□□ -1.66
HMGA1P17096 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMGA1P17096 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMGA1P17096 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMGA1P17096 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
HMGA1P17096 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
HMGA1P17096 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.71□□□□□ -1.66
HMGA1P17096 AC083837.1-201ENST00000565297 2994 ntBASIC4.71□□□□□ -1.66
HMGA1P17096 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMGA1P17096 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMGA1P17096 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
HMGA1P17096 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGA1P17096 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGA1P17096 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
HMGA1P17096 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGA1P17096 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HMGA1P17096 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.7□□□□□ -1.66
HMGA1P17096 STX3-208ENST00000641815 3236 ntBASIC4.7□□□□□ -1.66
HMGA1P17096 AC008033.1-201ENST00000216407 1162 ntBASIC4.7□□□□□ -1.66
HMGA1P17096 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGA1P17096 OR5P1P-201ENST00000299512 925 ntBASIC4.7□□□□□ -1.66
HMGA1P17096 RNU1-83P-201ENST00000363426 164 ntBASIC4.7□□□□□ -1.66
HMGA1P17096 UBBP2-201ENST00000376781 231 ntBASIC4.7□□□□□ -1.66
HMGA1P17096 U3.23-201ENST00000391132 200 ntBASIC4.7□□□□□ -1.66
HMGA1P17096 ST13P16-201ENST00000401760 781 ntBASIC4.7□□□□□ -1.66
HMGA1P17096 AL592291.1-201ENST00000403830 352 ntBASIC4.7□□□□□ -1.66
HMGA1P17096 AL356967.1-201ENST00000406305 431 ntBASIC4.7□□□□□ -1.66
HMGA1P17096 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGA1P17096 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGA1P17096 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.7□□□□□ -1.66
HMGA1P17096 DHFRP3-201ENST00000455595 559 ntBASIC4.7□□□□□ -1.66
HMGA1P17096 AK4P6-201ENST00000505168 528 ntBASIC4.7□□□□□ -1.66
HMGA1P17096 HMGB3P16-201ENST00000508037 287 ntBASIC4.7□□□□□ -1.66
HMGA1P17096 AC106806.2-201ENST00000509365 500 ntBASIC4.7□□□□□ -1.66
HMGA1P17096 SNORA70.11-201ENST00000515987 138 ntBASIC4.7□□□□□ -1.66
HMGA1P17096 SNORA70.13-201ENST00000516116 138 ntBASIC4.7□□□□□ -1.66
HMGA1P17096 GTF2IP11-201ENST00000526931 420 ntBASIC4.7□□□□□ -1.66
HMGA1P17096 AC069366.1-201ENST00000583159 838 ntBASIC4.7□□□□□ -1.66
HMGA1P17096 ADAD1P2-201ENST00000588476 646 ntBASIC4.7□□□□□ -1.66
HMGA1P17096 AC005520.3-201ENST00000602874 370 ntBASIC4.7□□□□□ -1.66
HMGA1P17096 BPIFA4P-203ENST00000603168 689 ntBASIC4.7□□□□□ -1.66
HMGA1P17096 AC023762.1-201ENST00000603280 584 ntBASIC4.7□□□□□ -1.66
HMGA1P17096 AC020910.2-201ENST00000603635 610 ntBASIC4.7□□□□□ -1.66
HMGA1P17096 AP000843.1-201ENST00000624880 701 ntBASIC4.7□□□□□ -1.66
HMGA1P17096 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
HMGA1P17096 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
HMGA1P17096 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGA1P17096 AC090017.1-201ENST00000548612 1779 ntBASIC4.7□□□□□ -1.66
HMGA1P17096 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMGA1P17096 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGA1P17096 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGA1P17096 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGA1P17096 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
HMGA1P17096 TCP11X1-202ENST00000622971 1372 ntBASIC4.69□□□□□ -1.66
HMGA1P17096 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HMGA1P17096 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMGA1P17096 AL672167.1-204ENST00000641875 3017 ntBASIC4.69□□□□□ -1.66
HMGA1P17096 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HMGA1P17096 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HMGA1P17096 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGA1P17096 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HMGA1P17096 SNRPFP1-201ENST00000414761 252 ntBASIC4.69□□□□□ -1.66
HMGA1P17096 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.69□□□□□ -1.66
HMGA1P17096 NPM1P26-201ENST00000426339 738 ntBASIC4.69□□□□□ -1.66
HMGA1P17096 NUTF2P7-201ENST00000453086 375 ntBASIC4.69□□□□□ -1.66
HMGA1P17096 OR11I1P-201ENST00000486033 954 ntBASIC4.69□□□□□ -1.66
HMGA1P17096 RNA5SP303-201ENST00000516192 130 ntBASIC4.69□□□□□ -1.66
HMGA1P17096 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.69□□□□□ -1.66
HMGA1P17096 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.69□□□□□ -1.66
HMGA1P17096 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGA1P17096 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
HMGA1P17096 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMGA1P17096 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.69□□□□□ -1.66
HMGA1P17096 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.69□□□□□ -1.66
HMGA1P17096 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.69□□□□□ -1.66
HMGA1P17096 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HMGA1P17096 MIR4675-201ENST00000577898 77 ntBASIC4.69□□□□□ -1.66
HMGA1P17096 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGA1P17096 AL049840.6-202ENST00000603373 279 ntBASIC4.69□□□□□ -1.66
HMGA1P17096 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms