Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.08□□□□□ -1.44
HLA-DOAP06340 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DOAP06340 AL590399.4-201ENST00000436561 601 ntBASIC6.08□□□□□ -1.44
HLA-DOAP06340 RHOT1P3-201ENST00000436571 331 ntBASIC6.08□□□□□ -1.44
HLA-DOAP06340 MTND4P32-201ENST00000437189 1237 ntBASIC6.08□□□□□ -1.44
HLA-DOAP06340 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HLA-DOAP06340 PRPF38AP2-201ENST00000438179 851 ntBASIC6.08□□□□□ -1.44
HLA-DOAP06340 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DOAP06340 RPL34P20-201ENST00000442771 351 ntBASIC6.08□□□□□ -1.44
HLA-DOAP06340 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DOAP06340 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DOAP06340 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DOAP06340 RN7SL814P-201ENST00000487715 300 ntBASIC6.08□□□□□ -1.44
HLA-DOAP06340 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DOAP06340 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DOAP06340 AC140172.1-201ENST00000502928 141 ntBASIC6.08□□□□□ -1.44
HLA-DOAP06340 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.08□□□□□ -1.44
HLA-DOAP06340 AC097173.1-201ENST00000505862 819 ntBASIC6.08□□□□□ -1.44
HLA-DOAP06340 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DOAP06340 RNU6-311P-201ENST00000516224 102 ntBASIC6.08□□□□□ -1.44
HLA-DOAP06340 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DOAP06340 AC010476.1-201ENST00000519111 851 ntBASIC6.08□□□□□ -1.44
HLA-DOAP06340 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DOAP06340 AC007834.2-201ENST00000536310 343 ntBASIC6.08□□□□□ -1.44
HLA-DOAP06340 NMNAT1P1-201ENST00000554095 876 ntBASIC6.08□□□□□ -1.44
HLA-DOAP06340 HNRNPCP1-201ENST00000556181 766 ntBASIC6.08□□□□□ -1.44
HLA-DOAP06340 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DOAP06340 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC6.08□□□□□ -1.44
HLA-DOAP06340 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC6.08□□□□□ -1.44
HLA-DOAP06340 AC010632.3-201ENST00000611377 369 ntBASIC6.08□□□□□ -1.44
HLA-DOAP06340 AC021755.4-201ENST00000616620 456 ntBASIC6.08□□□□□ -1.44
HLA-DOAP06340 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DOAP06340 AP000547.3-204ENST00000588548 2523 ntBASIC6.08□□□□□ -1.44
HLA-DOAP06340 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DOAP06340 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DOAP06340 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
HLA-DOAP06340 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
HLA-DOAP06340 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.08□□□□□ -1.44
HLA-DOAP06340 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DOAP06340 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DOAP06340 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DOAP06340 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DOAP06340 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.07□□□□□ -1.44
HLA-DOAP06340 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
HLA-DOAP06340 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.07□□□□□ -1.44
HLA-DOAP06340 CASC19-221ENST00000641309 1382 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DOAP06340 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DOAP06340 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.07□□□□□ -1.44
HLA-DOAP06340 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
HLA-DOAP06340 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DOAP06340 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DOAP06340 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DOAP06340 RNA5SP428-201ENST00000365129 132 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 RNU6-354P-201ENST00000383862 107 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 RNU6-610P-201ENST00000384264 107 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HLA-DOAP06340 CASP3-203ENST00000393588 677 ntTSL 4 BASIC6.07□□□□□ -1.44
HLA-DOAP06340 ATP5F1P2-201ENST00000398143 760 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 LRRC37BP1-201ENST00000398851 714 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 AC107081.1-201ENST00000414975 361 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 CHEK2P3-201ENST00000416118 248 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.07□□□□□ -1.44
HLA-DOAP06340 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 AL606495.1-201ENST00000422100 813 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.07□□□□□ -1.44
HLA-DOAP06340 AC009784.1-201ENST00000426484 460 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 RPL7AP49-201ENST00000429522 581 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 AL591438.1-201ENST00000433508 581 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 AL031313.1-201ENST00000448435 256 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 RN7SL443P-201ENST00000464331 290 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 AC135999.1-201ENST00000478962 479 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.07□□□□□ -1.44
HLA-DOAP06340 HMGB1P3-201ENST00000502802 616 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 OR5H3P-201ENST00000502817 919 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 AC112518.2-201ENST00000508565 425 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC6.07□□□□□ -1.44
HLA-DOAP06340 AC002456.2-201ENST00000509356 380 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC6.07□□□□□ -1.44
HLA-DOAP06340 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.07□□□□□ -1.44
HLA-DOAP06340 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.07□□□□□ -1.44
HLA-DOAP06340 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC6.07□□□□□ -1.44
HLA-DOAP06340 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.07□□□□□ -1.44
HLA-DOAP06340 AC091057.2-201ENST00000602594 792 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 AC002487.1-201ENST00000604565 994 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 AC087783.2-201ENST00000605070 562 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 OR7A19P-201ENST00000608051 733 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.07□□□□□ -1.44
HLA-DOAP06340 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC6.07□□□□□ -1.44
HLA-DOAP06340 AC006210.2-201ENST00000367074 1545 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DOAP06340 AC017002.4-201ENST00000604721 1525 ntBASIC6.07□□□□□ -1.44
HLA-DOAP06340 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DOAP06340 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DOAP06340 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DOAP06340 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HLA-DOAP06340 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.06□□□□□ -1.44
HLA-DOAP06340 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms