Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC068446.1-201ENST00000556425 1549 ntBASIC5.26□□□□□ -1.57
CHRNA1P02708 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CHRNA1P02708 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CHRNA1P02708 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.26□□□□□ -1.57
CHRNA1P02708 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CHRNA1P02708 AC011755.1-201ENST00000623763 2049 ntBASIC5.26□□□□□ -1.57
CHRNA1P02708 AL137100.1-201ENST00000556703 1620 ntBASIC5.26□□□□□ -1.57
CHRNA1P02708 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CHRNA1P02708 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.26□□□□□ -1.57
CHRNA1P02708 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CHRNA1P02708 AC063976.2-201ENST00000425667 3556 ntBASIC5.25□□□□□ -1.57
CHRNA1P02708 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
CHRNA1P02708 AL356317.1-201ENST00000396110 1436 ntBASIC5.25□□□□□ -1.57
CHRNA1P02708 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.25□□□□□ -1.57
CHRNA1P02708 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CHRNA1P02708 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CHRNA1P02708 RNA5SP397-201ENST00000391323 118 ntBASIC5.25□□□□□ -1.57
CHRNA1P02708 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.25□□□□□ -1.57
CHRNA1P02708 ELOCP19-201ENST00000411919 318 ntBASIC5.25□□□□□ -1.57
CHRNA1P02708 CHIAP3-201ENST00000423668 1133 ntBASIC5.25□□□□□ -1.57
CHRNA1P02708 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.25□□□□□ -1.57
CHRNA1P02708 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.25□□□□□ -1.57
CHRNA1P02708 TCEA1P3-201ENST00000443005 880 ntBASIC5.25□□□□□ -1.57
CHRNA1P02708 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.25□□□□□ -1.57
CHRNA1P02708 PRPF38AP1-201ENST00000451976 933 ntBASIC5.25□□□□□ -1.57
CHRNA1P02708 OR52E3P-201ENST00000452083 936 ntBASIC5.25□□□□□ -1.57
CHRNA1P02708 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.25□□□□□ -1.57
CHRNA1P02708 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.25□□□□□ -1.57
CHRNA1P02708 AC013356.1-201ENST00000489027 564 ntBASIC5.25□□□□□ -1.57
CHRNA1P02708 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.25□□□□□ -1.57
CHRNA1P02708 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.25□□□□□ -1.57
CHRNA1P02708 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.25□□□□□ -1.57
CHRNA1P02708 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.25□□□□□ -1.57
CHRNA1P02708 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.25□□□□□ -1.57
CHRNA1P02708 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.25□□□□□ -1.57
CHRNA1P02708 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.25□□□□□ -1.57
CHRNA1P02708 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.25□□□□□ -1.57
CHRNA1P02708 RPL12P25-202ENST00000598100 674 ntBASIC5.25□□□□□ -1.57
CHRNA1P02708 AL137072.1-201ENST00000603444 466 ntBASIC5.25□□□□□ -1.57
CHRNA1P02708 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.25□□□□□ -1.57
CHRNA1P02708 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CHRNA1P02708 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CHRNA1P02708 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CHRNA1P02708 TRIM51GP-201ENST00000534741 1350 ntBASIC5.25□□□□□ -1.57
CHRNA1P02708 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.25□□□□□ -1.57
CHRNA1P02708 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CHRNA1P02708 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CHRNA1P02708 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CHRNA1P02708 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CHRNA1P02708 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA1P02708 AC004817.4-201ENST00000602396 3625 ntBASIC5.24□□□□□ -1.57
CHRNA1P02708 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.24□□□□□ -1.57
CHRNA1P02708 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.24□□□□□ -1.57
CHRNA1P02708 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.24□□□□□ -1.57
CHRNA1P02708 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.24□□□□□ -1.57
CHRNA1P02708 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.24□□□□□ -1.57
CHRNA1P02708 AC073136.1-201ENST00000449426 2884 ntBASIC5.24□□□□□ -1.57
CHRNA1P02708 AC005005.4-201ENST00000623789 16698 ntBASIC5.24□□□□□ -1.57
CHRNA1P02708 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.24□□□□□ -1.57
CHRNA1P02708 Y_RNA.62-201ENST00000362840 99 ntBASIC5.24□□□□□ -1.57
CHRNA1P02708 SNORA70.2-201ENST00000364506 135 ntBASIC5.24□□□□□ -1.57
CHRNA1P02708 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA1P02708 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.24□□□□□ -1.57
CHRNA1P02708 AC096644.3-201ENST00000416788 338 ntBASIC5.24□□□□□ -1.57
CHRNA1P02708 VN1R31P-201ENST00000417498 730 ntBASIC5.24□□□□□ -1.57
CHRNA1P02708 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.24□□□□□ -1.57
CHRNA1P02708 AC097523.2-201ENST00000435551 652 ntBASIC5.24□□□□□ -1.57
CHRNA1P02708 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.24□□□□□ -1.57
CHRNA1P02708 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.24□□□□□ -1.57
CHRNA1P02708 RN7SL517P-201ENST00000462240 305 ntBASIC5.24□□□□□ -1.57
CHRNA1P02708 AC103987.1-201ENST00000473394 348 ntBASIC5.24□□□□□ -1.57
CHRNA1P02708 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.24□□□□□ -1.57
CHRNA1P02708 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.24□□□□□ -1.57
CHRNA1P02708 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.24□□□□□ -1.57
CHRNA1P02708 AC100784.1-201ENST00000522790 310 ntBASIC5.24□□□□□ -1.57
CHRNA1P02708 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA1P02708 AC105129.1-201ENST00000560250 297 ntBASIC5.24□□□□□ -1.57
CHRNA1P02708 AC093249.4-201ENST00000564755 259 ntBASIC5.24□□□□□ -1.57
CHRNA1P02708 AC136624.4-201ENST00000573044 370 ntBASIC5.24□□□□□ -1.57
CHRNA1P02708 AP005119.2-201ENST00000579735 1105 ntBASIC5.24□□□□□ -1.57
CHRNA1P02708 SNORA74C-1-201ENST00000580726 201 ntBASIC5.24□□□□□ -1.57
CHRNA1P02708 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.24□□□□□ -1.57
CHRNA1P02708 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.24□□□□□ -1.57
CHRNA1P02708 AL121873.1-201ENST00000616013 524 ntBASIC5.24□□□□□ -1.57
CHRNA1P02708 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.24□□□□□ -1.57
CHRNA1P02708 AC016717.3-201ENST00000624730 554 ntBASIC5.24□□□□□ -1.57
CHRNA1P02708 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.24□□□□□ -1.57
CHRNA1P02708 MTCO1P22-201ENST00000604619 1360 ntBASIC5.24□□□□□ -1.57
CHRNA1P02708 AC026523.2-201ENST00000625039 7739 ntBASIC5.24□□□□□ -1.57
CHRNA1P02708 STX3-208ENST00000641815 3236 ntBASIC5.24□□□□□ -1.57
CHRNA1P02708 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA1P02708 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.24□□□□□ -1.57
CHRNA1P02708 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.24□□□□□ -1.57
CHRNA1P02708 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CHRNA1P02708 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CHRNA1P02708 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA1P02708 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.24□□□□□ -1.57
CHRNA1P02708 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
CHRNA1P02708 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNA1P02708 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms