Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.32□□□□□ -1.72
SPTA1P02549 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.32□□□□□ -1.72
SPTA1P02549 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.32□□□□□ -1.72
SPTA1P02549 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.32□□□□□ -1.72
SPTA1P02549 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.32□□□□□ -1.72
SPTA1P02549 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
SPTA1P02549 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SPTA1P02549 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SPTA1P02549 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC4.31□□□□□ -1.72
SPTA1P02549 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SPTA1P02549 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SPTA1P02549 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SPTA1P02549 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SPTA1P02549 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SPTA1P02549 MIR659-201ENST00000384963 97 ntBASIC4.31□□□□□ -1.72
SPTA1P02549 RPL37P1-201ENST00000432310 284 ntBASIC4.31□□□□□ -1.72
SPTA1P02549 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.31□□□□□ -1.72
SPTA1P02549 SEPT10P1-201ENST00000517342 1162 ntBASIC4.31□□□□□ -1.72
SPTA1P02549 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.31□□□□□ -1.72
SPTA1P02549 AL450472.3-201ENST00000615578 367 ntBASIC4.31□□□□□ -1.72
SPTA1P02549 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SPTA1P02549 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SPTA1P02549 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
SPTA1P02549 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.31□□□□□ -1.72
SPTA1P02549 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC4.31□□□□□ -1.72
SPTA1P02549 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.31□□□□□ -1.72
SPTA1P02549 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC4.31□□□□□ -1.72
SPTA1P02549 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.31□□□□□ -1.72
SPTA1P02549 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SPTA1P02549 RNA5SP432-201ENST00000362480 116 ntBASIC4.31□□□□□ -1.72
SPTA1P02549 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SPTA1P02549 HMGB3P5-201ENST00000428894 612 ntBASIC4.31□□□□□ -1.72
SPTA1P02549 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC4.31□□□□□ -1.72
SPTA1P02549 TCEA1P3-201ENST00000443005 880 ntBASIC4.31□□□□□ -1.72
SPTA1P02549 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.31□□□□□ -1.72
SPTA1P02549 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.31□□□□□ -1.72
SPTA1P02549 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.31□□□□□ -1.72
SPTA1P02549 TAAR4P-201ENST00000454843 1039 ntBASIC4.31□□□□□ -1.72
SPTA1P02549 RN7SL189P-201ENST00000468631 289 ntBASIC4.31□□□□□ -1.72
SPTA1P02549 RPL7P49-201ENST00000471402 708 ntBASIC4.31□□□□□ -1.72
SPTA1P02549 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.31□□□□□ -1.72
SPTA1P02549 MTND4LP31-201ENST00000514859 294 ntBASIC4.31□□□□□ -1.72
SPTA1P02549 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC4.31□□□□□ -1.72
SPTA1P02549 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.31□□□□□ -1.72
SPTA1P02549 AC010424.2-201ENST00000607594 443 ntBASIC4.31□□□□□ -1.72
SPTA1P02549 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.31□□□□□ -1.72
SPTA1P02549 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.31□□□□□ -1.72
SPTA1P02549 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SPTA1P02549 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SPTA1P02549 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SPTA1P02549 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SPTA1P02549 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.3□□□□□ -1.72
SPTA1P02549 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
SPTA1P02549 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SPTA1P02549 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.3□□□□□ -1.72
SPTA1P02549 BX323845.1-201ENST00000432417 179 ntBASIC4.3□□□□□ -1.72
SPTA1P02549 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.3□□□□□ -1.72
SPTA1P02549 AL592148.3-201ENST00000608771 2646 ntBASIC4.3□□□□□ -1.72
SPTA1P02549 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SPTA1P02549 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SPTA1P02549 TLK1P1-201ENST00000456760 2440 ntBASIC4.3□□□□□ -1.72
SPTA1P02549 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SPTA1P02549 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.3□□□□□ -1.72
SPTA1P02549 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.3□□□□□ -1.72
SPTA1P02549 ATP5HP3-201ENST00000396994 486 ntBASIC4.3□□□□□ -1.72
SPTA1P02549 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.3□□□□□ -1.72
SPTA1P02549 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.3□□□□□ -1.72
SPTA1P02549 RPL21P126-201ENST00000470049 478 ntBASIC4.3□□□□□ -1.72
SPTA1P02549 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.3□□□□□ -1.72
SPTA1P02549 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.3□□□□□ -1.72
SPTA1P02549 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.3□□□□□ -1.72
SPTA1P02549 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.3□□□□□ -1.72
SPTA1P02549 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.3□□□□□ -1.72
SPTA1P02549 AC069061.3-201ENST00000582254 823 ntBASIC4.3□□□□□ -1.72
SPTA1P02549 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.3□□□□□ -1.72
SPTA1P02549 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.3□□□□□ -1.72
SPTA1P02549 AC010632.3-201ENST00000611377 369 ntBASIC4.3□□□□□ -1.72
SPTA1P02549 AL391261.4-201ENST00000616012 481 ntBASIC4.3□□□□□ -1.72
SPTA1P02549 BX005214.3-202ENST00000619809 325 ntBASIC4.3□□□□□ -1.72
SPTA1P02549 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SPTA1P02549 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SPTA1P02549 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SPTA1P02549 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SPTA1P02549 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
SPTA1P02549 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.29□□□□□ -1.72
SPTA1P02549 Z98745.1-201ENST00000402553 494 ntBASIC4.29□□□□□ -1.72
SPTA1P02549 RPL23AP26-201ENST00000412728 464 ntBASIC4.29□□□□□ -1.72
SPTA1P02549 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.29□□□□□ -1.72
SPTA1P02549 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.29□□□□□ -1.72
SPTA1P02549 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SPTA1P02549 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.29□□□□□ -1.72
SPTA1P02549 RN7SL441P-201ENST00000492388 296 ntBASIC4.29□□□□□ -1.72
SPTA1P02549 RN7SL558P-201ENST00000497468 299 ntBASIC4.29□□□□□ -1.72
SPTA1P02549 IGLVIV-65-201ENST00000517313 360 ntBASIC4.29□□□□□ -1.72
SPTA1P02549 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.29□□□□□ -1.72
SPTA1P02549 MRPL49P2-201ENST00000521066 465 ntBASIC4.29□□□□□ -1.72
SPTA1P02549 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SPTA1P02549 AC005261.4-201ENST00000600047 1385 ntBASIC4.29□□□□□ -1.72
SPTA1P02549 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SPTA1P02549 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms