Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL1A1P02452 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.52□□□□□ -1.53
COL1A1P02452 RPS3AP54-201ENST00000435535 734 ntBASIC5.52□□□□□ -1.53
COL1A1P02452 AC114755.5-201ENST00000447760 831 ntBASIC5.52□□□□□ -1.53
COL1A1P02452 RPS27AP16-201ENST00000492222 470 ntBASIC5.52□□□□□ -1.53
COL1A1P02452 AC098799.3-201ENST00000506095 438 ntBASIC5.52□□□□□ -1.53
COL1A1P02452 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.52□□□□□ -1.53
COL1A1P02452 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.52□□□□□ -1.53
COL1A1P02452 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL1A1P02452 MIR2116-201ENST00000517221 80 ntBASIC5.52□□□□□ -1.53
COL1A1P02452 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.52□□□□□ -1.53
COL1A1P02452 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL1A1P02452 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.52□□□□□ -1.53
COL1A1P02452 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL1A1P02452 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.52□□□□□ -1.53
COL1A1P02452 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.52□□□□□ -1.53
COL1A1P02452 MIR6891-201ENST00000618788 93 ntBASIC5.52□□□□□ -1.53
COL1A1P02452 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL1A1P02452 AC133552.1-201ENST00000569988 4007 ntBASIC5.52□□□□□ -1.53
COL1A1P02452 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
COL1A1P02452 CPHL1P-201ENST00000461341 3407 ntBASIC5.52□□□□□ -1.53
COL1A1P02452 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL1A1P02452 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL1A1P02452 AL139095.3-201ENST00000419672 1203 ntBASIC5.51□□□□□ -1.53
COL1A1P02452 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.51□□□□□ -1.53
COL1A1P02452 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.51□□□□□ -1.53
COL1A1P02452 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.51□□□□□ -1.53
COL1A1P02452 AC104651.2-201ENST00000447549 528 ntBASIC5.51□□□□□ -1.53
COL1A1P02452 ISCUP1-201ENST00000454451 448 ntBASIC5.51□□□□□ -1.53
COL1A1P02452 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.51□□□□□ -1.53
COL1A1P02452 RPL21P129-201ENST00000491732 478 ntBASIC5.51□□□□□ -1.53
COL1A1P02452 AP000827.1-201ENST00000527814 258 ntBASIC5.51□□□□□ -1.53
COL1A1P02452 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL1A1P02452 LSM3P2-201ENST00000551246 273 ntBASIC5.51□□□□□ -1.53
COL1A1P02452 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.51□□□□□ -1.53
COL1A1P02452 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.51□□□□□ -1.53
COL1A1P02452 ZYXP1-201ENST00000617638 118 ntBASIC5.51□□□□□ -1.53
COL1A1P02452 AL445567.2-201ENST00000618935 498 ntBASIC5.51□□□□□ -1.53
COL1A1P02452 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
COL1A1P02452 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL1A1P02452 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.51□□□□□ -1.53
COL1A1P02452 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
COL1A1P02452 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.51□□□□□ -1.53
COL1A1P02452 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL1A1P02452 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL1A1P02452 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.51□□□□□ -1.53
COL1A1P02452 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL1A1P02452 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
COL1A1P02452 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL1A1P02452 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.51□□□□□ -1.53
COL1A1P02452 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
COL1A1P02452 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
COL1A1P02452 ASNSP1-204ENST00000641977 1664 ntBASIC5.51□□□□□ -1.53
COL1A1P02452 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL1A1P02452 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL1A1P02452 ATP5F1P2-201ENST00000398143 760 ntBASIC5.51□□□□□ -1.53
COL1A1P02452 AL583835.1-201ENST00000399570 407 ntBASIC5.51□□□□□ -1.53
COL1A1P02452 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.51□□□□□ -1.53
COL1A1P02452 Z74021.1-201ENST00000423610 407 ntBASIC5.51□□□□□ -1.53
COL1A1P02452 RPL21P43-201ENST00000425440 472 ntBASIC5.51□□□□□ -1.53
COL1A1P02452 AC011998.1-201ENST00000433403 117 ntBASIC5.51□□□□□ -1.53
COL1A1P02452 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.51□□□□□ -1.53
COL1A1P02452 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.51□□□□□ -1.53
COL1A1P02452 AC020890.1-201ENST00000491837 504 ntBASIC5.51□□□□□ -1.53
COL1A1P02452 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.51□□□□□ -1.53
COL1A1P02452 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.51□□□□□ -1.53
COL1A1P02452 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.51□□□□□ -1.53
COL1A1P02452 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.51□□□□□ -1.53
COL1A1P02452 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.51□□□□□ -1.53
COL1A1P02452 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.51□□□□□ -1.53
COL1A1P02452 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.51□□□□□ -1.53
COL1A1P02452 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.51□□□□□ -1.53
COL1A1P02452 AP000843.1-201ENST00000624880 701 ntBASIC5.51□□□□□ -1.53
COL1A1P02452 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL1A1P02452 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.5□□□□□ -1.53
COL1A1P02452 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
COL1A1P02452 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
COL1A1P02452 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
COL1A1P02452 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL1A1P02452 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL1A1P02452 AL022393.1-201ENST00000625142 1677 ntBASIC5.5□□□□□ -1.53
COL1A1P02452 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL1A1P02452 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.5□□□□□ -1.53
COL1A1P02452 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
COL1A1P02452 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
COL1A1P02452 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
COL1A1P02452 MIR134-201ENST00000385258 73 ntBASIC5.5□□□□□ -1.53
COL1A1P02452 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.5□□□□□ -1.53
COL1A1P02452 AL445189.1-201ENST00000405722 338 ntBASIC5.5□□□□□ -1.53
COL1A1P02452 RPS12P10-201ENST00000427031 377 ntBASIC5.5□□□□□ -1.53
COL1A1P02452 EEF1A1P1-201ENST00000447052 739 ntBASIC5.5□□□□□ -1.53
COL1A1P02452 AL359073.1-201ENST00000448036 403 ntBASIC5.5□□□□□ -1.53
COL1A1P02452 RN7SL98P-201ENST00000462271 300 ntBASIC5.5□□□□□ -1.53
COL1A1P02452 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.5□□□□□ -1.53
COL1A1P02452 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.5□□□□□ -1.53
COL1A1P02452 AC011477.5-201ENST00000586571 259 ntBASIC5.5□□□□□ -1.53
COL1A1P02452 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.5□□□□□ -1.53
COL1A1P02452 AC130352.1-201ENST00000602979 661 ntBASIC5.5□□□□□ -1.53
COL1A1P02452 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL1A1P02452 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms